Sequence of DPV Pepino mosaic virus

Pepino mosaic virus isolate PepMV-Pa TGB1 gene, partial cds.

ACC No: EU770393

Dated: 2009-05-13 | Length: 704 | CRC: 857184027

                
ID   EU770393; SV 1; linear; genomic RNA; STD; VRL; 704 BP.
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AC   EU770393;
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DT   27-JUN-2008 (Rel. 96, Created)
DT   13-MAY-2009 (Rel. 100, Last updated, Version 2)
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DE   Pepino mosaic virus isolate PepMV-Pa TGB1 gene, partial cds.
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KW   .
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OS   Pepino mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC   Potexvirus.
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RN   [1]
RP   1-704
RX   PUBMED; 19333548.
RA   Hasiow-Jaroszewska B., Borodynko N., Pospieszny H.;
RT   "Infectious RNA transcripts derived from cloned cDNA of a pepino mosaic
RT   virus isolate";
RL   Arch. Virol. 154(5):853-856(2009).
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RN   [2]
RP   1-704
RA   Hasiow B., Borodynko N., Pospieszny H.;
RT   ;
RL   Submitted (29-MAY-2008) to the EMBL/GenBank/DDBJ databases.
RL   Virology and Bacteriology, Institute of Plant Protection, Wegorka 20,
RL   Poznan 60-318, Poland
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FH   Key             Location/Qualifiers
FH
FT   source          1. .704
FT                   /organism="Pepino mosaic virus"
FT                   /isolate="PepMV-Pa"
FT                   /mol_type="genomic RNA"
FT                   /country="Poland"
FT                   /db_xref="taxon:112229"
FT   CDS             1. .>704
FT                   /codon_start=1
FT                   /product="TGB1"
FT                   /note="triple gene block 1"
FT                   /db_xref="GOA:B3VMH2"
FT                   /db_xref="InterPro:IPR000606"
FT                   /db_xref="UniProtKB/TrEMBL:B3VMH2"
FT                   /protein_id="ACE88988.1"
FT                   /translation="MERSTLINLLLLHKFEHKINTEGIIVVHGIAGTGKTTLLRTLFSA
FT                   YPSLVIGSPRPCYLDKANKISQVCLSCFPNTLCDIVDEYHLLESFPEPKLAIFGDPCQC
FT                   TYIDRLRTPNYTSFRTHRFGKSTAALLNKLFDLNIESVKAQDDTVEYFDPFAVDPSEHI
FT                   SASEKEVLEFVGDQVETTSSEELAGLEFSEVTFYCTTLAGAVQENPAKTFISLTRHTSK
FT                   LTIGELNARSDS"
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SQ   Sequence 704 BP; 213 A; 156 C; 122 G; 213 T; 0 other;

eu770393 Length: 704  13-MAY-2009  Type: N  Check: 1338  ..

       1  atggaaagat caactttgat caatttactt ctgttacaca aatttgaaca
      51  caagattaac actgaaggaa tcattgttgt gcacggaatt gctggaactg
     101  ggaaaaccac attgcttagg actttatttt ctgcataccc tagcttagtt
     151  ataggttcac ctaggccttg ttacttagat aaagctaata aaatttcaca
     201  agtttgcctt tcttgttttc caaatacctt gtgtgacatt gttgacgagt
     251  accatctctt agaaagtttt cctgaaccaa aactagccat ttttggtgac
     301  ccctgtcagt gcacttacat tgataggttg agaacaccca actacacatc
     351  cttcagaaca caccgatttg gcaaatccac tgctgctcta ctaaacaagt
     401  tatttgatct taacattgag tcagtcaaag cacaagacga cacagtagaa
     451  tactttgatc ctttcgcagt ggacccctcc gaacacattt ctgcttcaga
     501  aaaagaagtt ttggaatttg taggtgatca agttgagact acaagctctg
     551  aagaactagc tggtctcgag tttagtgaag ttactttcta ctgtaccaca
     601  cttgctggtg ctgttcaaga aaatcctgcc aaaaccttca tttcactcac
     651  tagacacact tcaaagctca caattggtga actaaatgcc aggtctgact
     701  ccta