Sequence of DPV Pepino mosaic virus

Pepino mosaic virus isolate PepMV-Pa coat protein gene, partial cds.

ACC No: EU770394

Dated: 2009-05-13 | Length: 711 | CRC: 1646481857

                
ID   EU770394; SV 1; linear; genomic RNA; STD; VRL; 711 BP.
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AC   EU770394;
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DT   27-JUN-2008 (Rel. 96, Created)
DT   13-MAY-2009 (Rel. 100, Last updated, Version 2)
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DE   Pepino mosaic virus isolate PepMV-Pa coat protein gene, partial cds.
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KW   .
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OS   Pepino mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC   Potexvirus.
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RN   [1]
RP   1-711
RX   PUBMED; 19333548.
RA   Hasiow-Jaroszewska B., Borodynko N., Pospieszny H.;
RT   "Infectious RNA transcripts derived from cloned cDNA of a pepino mosaic
RT   virus isolate";
RL   Arch. Virol. 154(5):853-856(2009).
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RN   [2]
RP   1-711
RA   Hasiow B., Borodynko N., Pospieszny H.;
RT   ;
RL   Submitted (29-MAY-2008) to the EMBL/GenBank/DDBJ databases.
RL   Virology and Bacteriology, Institute of Plant Protection, Wegorka 20,
RL   Poznan 60-318, Poland
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FH   Key             Location/Qualifiers
FH
FT   source          1. .711
FT                   /organism="Pepino mosaic virus"
FT                   /isolate="PepMV-Pa"
FT                   /mol_type="genomic RNA"
FT                   /country="Poland"
FT                   /db_xref="taxon:112229"
FT   CDS             1. .>711
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:B3VMH3"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:B3VMH3"
FT                   /protein_id="ACE88989.1"
FT                   /translation="MENQPTASNPSDAPPTAAQAGAQSPADFSNPNTAPSLSDLKKIKY
FT                   VSTVTSVATPAEIEALGKIFTAMGLAANETGPAMWDLARAYADVQSSKSAQLIGATPSN
FT                   PALSRRALAAQFDRINITPRQFCMYFAKIVWNILLDSNVPPANWAKLGYQEDTKFAAFD
FT                   FFDGVTNPASLQPADGLIRQPNEKELAAHSVAKYGALARQKISTGNYITTLGEVTRGHM
FT                   GGANTMYAIDAPPEL"
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SQ   Sequence 711 BP; 192 A; 195 C; 146 G; 178 T; 0 other;

eu770394 Length: 711  13-MAY-2009  Type: N  Check: 3565  ..

       1  atggaaaacc aacctacagc ttctaaccca tcagatgcac caccaactgc
      51  tgctcaagct ggtgcccaga gcccagccga cttctcaaat cctaatacag
     101  ctccttccct aagtgatttg aagaagatca aatacgtgtc aactgtcact
     151  tcagttgcca cgcctgctga aattgaggcc cttggcaaga tctttactgc
     201  catgggttta gcagccaatg agaccggacc tgccatgtgg gacctcgctc
     251  gtgcttatgc tgatgtgcaa agttcaaaat ctgcacaact tataggtgcc
     301  acaccatcca accctgcttt gtctagacgt gcacttgctg cacagtttga
     351  tcgtatcaat atcacaccca gacaattctg catgtatttt gcaaaaattg
     401  tttggaacat actgttagac agcaatgtgc cacctgccaa ctgggcaaaa
     451  ttgggctatc aggaagatac caagtttgct gcttttgact tctttgatgg
     501  agtcacaaat ccagctagtc tacagcctgc agatggccta atcaggcagc
     551  ccaatgaaaa agagcttgct gctcactcgg ttgctaaata tggcgccctt
     601  gcccgccaga aaatatccac tggtaactac atcaccaccc ttggtgaagt
     651  tacacgtggt cacatgggcg gcgccaacac tatgtacgca attgatgcac
     701  ctcctgaact t