Sequence of DPV Cotton leafroll dwarf virus

Cotton leafroll dwarf virus isolate CLRDV-Cas2 coat protein (CP) and movement protein (MP) genes, complete cds.

ACC No: EU871530

Dated: 2009-07-13 | Length: 606 | CRC: -2140117696

                
ID   EU871530; SV 1; linear; genomic RNA; STD; VRL; 606 BP.
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AC   EU871530;
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DT   08-JUL-2009 (Rel. 101, Created)
DT   13-JUL-2009 (Rel. 101, Last updated, Version 2)
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DE   Cotton leafroll dwarf virus isolate CLRDV-Cas2 coat protein (CP) and
DE   movement protein (MP) genes, complete cds.
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KW   .
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OS   Cotton leafroll dwarf virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC   unclassified Luteoviridae.
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RN   [1]
RC   Publication Status: Online-Only
RP   1-606
RX   PUBMED; 18937850.
RA   Silva T.F., Correa R.L., Castilho Y., Silvie P., Belot J.L., Vaslin M.F.;
RT   "Widespread distribution and a new recombinant species of Brazilian virus
RT   associated with cotton blue disease";
RL   Virol. J. 5:123-123(2008).
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RN   [2]
RP   1-606
RA   Silva T.F., Correa R.L., Castilho Y.G., Vaslin M.F.S.;
RT   ;
RL   Submitted (04-JUL-2008) to the EMBL/GenBank/DDBJ databases.
RL   Departamento de Virologia, Instituto de Microbiologia, Universidade Federal
RL   do Rio de Janeiro (UFRJ), Avenida Pau Brasil s/n CCS I014, Rio de Janeiro,
RL   RJ 21941-971, Brazil
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FH   Key             Location/Qualifiers
FH
FT   source          1. .606
FT                   /organism="Cotton leafroll dwarf virus"
FT                   /host="Gossypium hirsutum"
FT                   /isolate="CLRDV-Cas2"
FT                   /mol_type="genomic RNA"
FT                   /country="Brazil:Cascavel, PR"
FT                   /collection_date="2004"
FT                   /db_xref="taxon:312295"
FT   gene            1. .606
FT                   /gene="CP"
FT   CDS             1. .606
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="ACN50293.1"
FT                   /translation="MNTVVGRRTINGRRRPRRRNRRRQNQPVVVVQAPRNTQRRRRRRR
FT                   GGRNRTGGRIPGGPGASSETFVFSKDSLSGSSSGSITFGPSLSDCPAFSNGMLKAYHEY
FT                   KISMVLLEFISEASSTSSGSISYEVDPHCKLSTLSSTINKFGITKNGRKQFAASFINGQ
FT                   EWHDTSEDQFRILYKGNGSSSIAGSFRVTIRCQFHNPK"
FT   gene            32. .556
FT                   /gene="MP"
FT   CDS             32. .556
FT                   /codon_start=1
FT                   /gene="MP"
FT                   /product="movement protein"
FT                   /protein_id="ACN50294.1"
FT                   /translation="MEEDDHVGATGVGKISQWLWSKPLGTHNAEDDEDEEVVIGQEDAF
FT                   LEDQELQARHLFSQKTVSREVPQDQSRSGRLYQIARHSAMECSRPTMNIRSQWSYWSSS
FT                   PRPLQHPPVPSLTKWIHTVNCQPYPPRLTNSESPRTGGSNLRRLSSMDRNGMTPPRTSS
FT                   ESYTKAMVPRR"
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SQ   Sequence 606 BP; 176 A; 149 C; 147 G; 134 T; 0 other;

eu871530 Length: 606  13-JUL-2009  Type: N  Check: 4464  ..

       1  atgaatacgg tcgtgggtag aagaacgatt aatggaagaa gacgaccacg
      51  taggcgcaac aggcgtcggc aaaatcagcc agtggttgtg gtccaagccc
     101  ctcggaacac acaacgcaga agacgacgaa gacgaggagg tcgtaatagg
     151  acaggaggac gcattcctgg aggaccagga gcttcaagcg agacatttgt
     201  tttctcaaaa gacagtctct cgggaagttc ctcaggatca atcacgttcg
     251  ggccgtcttt atcagattgc ccggcattca gcaatggaat gctcaaggcc
     301  taccatgaat ataagatctc aatggtctta ttggagttca tctccgaggc
     351  ctcttcaaca tcctccggtt ccatctctta cgaagtggat ccacactgta
     401  aattgtcaac cctatcctcc acgattaaca aattcggaat caccaagaac
     451  gggaggaagc aatttgcggc gtctttcatc aatggacagg aatggcatga
     501  cacctccgag gaccagttca gaatcttata caaaggcaat ggttcctcgt
     551  cgatagctgg ctcttttagg gtcacaattc ggtgccaatt ccacaaccca
     601  aaatag