Sequence of DPV Cotton leafroll dwarf virus

Cotton leafroll dwarf virus isolate CLRDV-PO1 coat protein (CP) and movement protein (MP) genes, complete cds.

ACC No: EU871551

Dated: 2009-07-13 | Length: 606 | CRC: -1587635576

                
ID   EU871551; SV 1; linear; genomic RNA; STD; VRL; 606 BP.
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AC   EU871551;
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DT   08-JUL-2009 (Rel. 101, Created)
DT   13-JUL-2009 (Rel. 101, Last updated, Version 2)
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DE   Cotton leafroll dwarf virus isolate CLRDV-PO1 coat protein (CP) and
DE   movement protein (MP) genes, complete cds.
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KW   .
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OS   Cotton leafroll dwarf virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC   unclassified Luteoviridae.
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RN   [1]
RC   Publication Status: Online-Only
RP   1-606
RX   PUBMED; 18937850.
RA   Silva T.F., Correa R.L., Castilho Y., Silvie P., Belot J.L., Vaslin M.F.;
RT   "Widespread distribution and a new recombinant species of Brazilian virus
RT   associated with cotton blue disease";
RL   Virol. J. 5:123-123(2008).
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RN   [2]
RP   1-606
RA   Silva T.F., Correa R.L., Castilho Y.G., Vaslin M.F.S.;
RT   ;
RL   Submitted (04-JUL-2008) to the EMBL/GenBank/DDBJ databases.
RL   Departamento de Virologia, Instituto de Microbiologia, Universidade Federal
RL   do Rio de Janeiro (UFRJ), Avenida Pau Brasil s/n CCS I014, Rio de Janeiro,
RL   RJ 21941-971, Brazil
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FH   Key             Location/Qualifiers
FH
FT   source          1. .606
FT                   /organism="Cotton leafroll dwarf virus"
FT                   /host="Gossypium hirsutum"
FT                   /isolate="CLRDV-PO1"
FT                   /mol_type="genomic RNA"
FT                   /country="Brazil:Presidente Olegario, MT"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:312295"
FT   gene            1. .606
FT                   /gene="CP"
FT   CDS             1. .606
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="ACN50335.1"
FT                   /translation="MNTVVGRRTINGRRRPRRRNRRRQNKPVVVVQAPRNTQRRRRRRR
FT                   GGRNRTGGRIPGGPGASSETFVFSKDNLSGSSSGSITFGPSLSDCPAFSNGMLKAYHEY
FT                   KISMVLLEFISEASSTSSGSISYEVDPHCKLSTLSSTINKFGITKNGRKQFAASFINGQ
FT                   EWHDTSEDQFRILYKGNGSSSIAGSFKVTIRCQFHNPK"
FT   gene            32. .556
FT                   /gene="MP"
FT   CDS             32. .556
FT                   /codon_start=1
FT                   /gene="MP"
FT                   /product="movement protein"
FT                   /protein_id="ACN50336.1"
FT                   /translation="MEEDDHVDATGVGKISQWLWSKPLGTHNAEDDEDEEVVIGQEDAF
FT                   LEDQELRARHLFSQKTISREVPQDQSRSGRLYQIARHSAMECSRPTMNIRSQWSYWSSS
FT                   PRPLQHPPVPSLTKWIHTVNCLPSPPLLINSESPRTGGSNLRRLSSTDRNGMTPPRTSS
FT                   ESYTKAMVPRR"
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SQ   Sequence 606 BP; 177 A; 148 C; 144 G; 137 T; 0 other;

eu871551 Length: 606  13-JUL-2009  Type: N  Check: 4615  ..

       1  atgaatacgg tcgtgggtag aagaacgatt aatggaagaa gacgaccacg
      51  tagacgcaac aggcgtcggc aaaataagcc agtggttgtg gtccaagccc
     101  ctcggaacac acaacgcaga agacgacgaa gacgaggagg tcgtaatagg
     151  acaggaggac gcattcctgg aggaccagga gcttcgagcg agacatttgt
     201  tttctcaaaa gacaatctct cgggaagttc ctcaggatca atcacgttcg
     251  ggccgtcttt atcagattgc ccggcattca gcaatggaat gctcaaggcc
     301  taccatgaat ataagatctc aatggtctta ttggagttca tctccgaggc
     351  ctcttcaaca tcctccggtt ccatctctta cgaagtggat ccacactgta
     401  aattgtctac cctctcctcc actattaata aattcggaat caccaagaac
     451  gggaggaagc aatttgcggc gtctttcatc aacggacagg aatggcatga
     501  cacctccgag gaccagttca gaatcttata caaaggcaat ggttcctcgt
     551  cgatagctgg ctcttttaag gtcacaattc ggtgccaatt ccacaatcca
     601  aaatag