Sequence of DPV Pepino mosaic virus

Pepino mosaic virus strain OB coat protein gene, complete cds.

ACC No: EU888637

Dated: 2009-04-01 | Length: 714 | CRC: 1341424997

                
ID   EU888637; SV 1; linear; genomic RNA; STD; VRL; 714 BP.
XX
AC   EU888637;
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DT   18-AUG-2008 (Rel. 96, Created)
DT   01-APR-2009 (Rel. 100, Last updated, Version 2)
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DE   Pepino mosaic virus strain OB coat protein gene, complete cds.
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KW   .
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OS   Pepino mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC   Potexvirus.
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RN   [1]
RP   1-714
RA   Davino S., Accoto G.P., Masenga V., Torta L., Davino M.;
RT   "Basil (Ocimum basilicum), a new host of Pepino mosaic virus";
RL   Plant Pathol. 58(2):407-407(2009).
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RN   [2]
RP   1-714
RA   Davino S., Accotto G.P.;
RT   ;
RL   Submitted (16-JUL-2008) to the EMBL/GenBank/DDBJ databases.
RL   Dipartimento di Scienze e Tecnologie Fitosanitarie, Universita degli Studi
RL   di Catania, via S. Sofia 100, Catania 95123, Italy
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FH   Key             Location/Qualifiers
FH
FT   source          1. .714
FT                   /organism="Pepino mosaic virus"
FT                   /host="Ocimum basilicum (basil)"
FT                   /strain="OB"
FT                   /mol_type="genomic RNA"
FT                   /country="Italy"
FT                   /collection_date="2008"
FT                   /db_xref="taxon:112229"
FT   CDS             1. .714
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q699Z5"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:Q699Z5"
FT                   /protein_id="ACG68444.1"
FT                   /translation="MENQPTASNPSDAPPTAAQAGAQSPADFSNPNTAPSLSDLKKIKY
FT                   VSTVTSVATPAEIEALGKIFTAMGLAANETGPAMWDLARAYADVQSSKSAQLIGATPSN
FT                   PALSRRALAAQFDRINITPRQFCMYFAKIVWNILLDSNVPPANWAKLGYQEDTKFAAFD
FT                   FFDGVTNPASLQPADGLIRQPNEKELAAHSVAKYGALARQKISTGNYITTLGEVTRGHM
FT                   GGANTMYAIDAPPEL"
XX
SQ   Sequence 714 BP; 195 A; 192 C; 146 G; 181 T; 0 other;

eu888637 Length: 714  01-APR-2009  Type: N  Check: 36  ..

       1  atggaaaacc aacctacagc ttctaaccca tcagatgcac caccaactgc
      51  tgctcaagct ggtgcccaga gcccagccga cttctcaaat cctaatacag
     101  ctccttccct aagtgatttg aagaagatca aatacgtgtc aactgtcact
     151  tcagttgcca cgcctgctga aattgaggcc cttggtaaga tctttactgc
     201  catgggttta gcagccaatg agaccggacc tgccatgtgg gacctcgctc
     251  gtgcttatgc tgatgtgcaa agttcaaaat ctgcacaact tataggtgcc
     301  acaccatcca accctgcttt gtctagacgt gcacttgctg cacagtttga
     351  tcgtatcaat atcacaccca gacaattctg catgtatttt gcaaaaattg
     401  tctggaacat actgttagac agcaatgtgc cacctgccaa ctgggcaaaa
     451  ttgggctatc aggaagatac caagtttgct gcttttgact tttttgatgg
     501  agtcacaaac ccagctagtc tacagcctgc agatggctta atcaggcagc
     551  ccaatgaaaa agagcttgct gctcactcgg ttgctaaata tggtgccctt
     601  gctcgccaga aaatatccac tggcaactac atcaccaccc ttggtgaagt
     651  tacacgtggt cacatgggcg gagccaacac tatgtacgca attgatgcac
     701  ctcctgaact ttaa