Sequence of DPV Morogoro virus
Morogoro virus strain 3017/2004 segment S glycoprotein precursor (GPC) and nucleoprotein (NP) genes, complete cds.
ACC No: EU914103
Dated: 2009-07-31 | Length: 3383 | CRC: 878947918
ID EU914103; SV 1; linear; genomic RNA; STD; VRL; 3383 BP.
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AC EU914103;
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DT 31-JUL-2009 (Rel. 101, Created)
DT 31-JUL-2009 (Rel. 101, Last updated, Version 1)
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DE Morogoro virus strain 3017/2004 segment S glycoprotein precursor (GPC) and
DE nucleoprotein (NP) genes, complete cds.
XX
KW .
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OS Morogoro virus
OC Viruses; ssRNA negative-strand viruses; Arenaviridae; Arenavirus;
OC Old world arenaviruses; unclassified Old world arenaviruses.
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RN [1]
RP 1-3383
RA Gunther S., Leirs H.;
RT "A Mopeia-related arenavirus in Mastomys natalensis in Morogoro, Tanzania";
RL Unpublished.
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RN [2]
RP 1-3383
RA Gunther S., Leirs H.;
RT ;
RL Submitted (20-JUL-2008) to the EMBL/GenBank/DDBJ databases.
RL Virology, Bernhard-Nocht-Institute for Tropical Medicine,
RL Bernhard-Nocht-Str. 74, Hamburg 20359, Germany
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FH Key Location/Qualifiers
FH
FT source 1. .3383
FT /organism="Morogoro virus"
FT /segment="S"
FT /host="Mastomys natalensis"
FT /strain="3017/2004"
FT /mol_type="genomic RNA"
FT /country="Tanzania:Morogoro"
FT /collection_date="2004"
FT /db_xref="taxon:573900"
FT gene 46. .1515
FT /gene="GPC"
FT CDS 46. .1515
FT /codon_start=1
FT /gene="GPC"
FT /product="glycoprotein precursor"
FT /protein_id="ACJ24973.1"
FT /translation="MGQIVTFFQEVPHIIEEVMNIVLITLSLLAILKGIYNIMTCGIIG
FT LLTFLFLCGRSCSSIYKDNYQFLSLDLDMSGLNATMPLSCSKNNSHHYIQVRNDTGLEL
FT TLTNTSLLDHKFCNLSDAHKRNLYDKALMSIVTTFHLNIPNFNQYEVMSCDFNGGKITV
FT QYNLSHSSYVDAANHCGTIANGIMDTFRRMYWSNALSPSEYISGTTCIQTAYQYLIIQN
FT TTWEDHCVFSRPSPMGFLSLLSQRTKNFYISRRLLGLFTWTLSDSEGNDMPGGYCLTRS
FT MLIGMDLKCFGNTAVAKCNQQHDEEFCDMLRLFDFNKQAISRLKSEAQQSLNLITKAVN
FT SLINDQLIMKNHLRDLMGIPYCNYTKFWYLNDTRSGATSLPRCWLISNGSYLNETQFSR
FT DIEQEANNMLTDMLRKEYEKRQSTTPLGLVDLFVFSTSFYLISVFLHLIKIPTHRHIRG
FT KPCPKPHRINHMAICSCGFYKQPGIPTQWKR"
FT gene complement(1620. .3332)
FT /gene="NP"
FT CDS complement(1620. .3332)
FT /codon_start=1
FT /gene="NP"
FT /product="nucleoprotein"
FT /protein_id="ACJ24974.1"
FT /translation="MSNSKEVKSFLWTQSLRRELSGFCTNVKVQVIKDAQALLHGLDFS
FT EVSNVQRLMRKEKRDDSDLKRLRDLNQAVNNLVELKSTQQKNVLRVGTLTPDDLLVLAA
FT DLDRLKAKVIRSERPLAAGVYMGNLTAQQLEQRKVLLQMVGMGGGPLGREPPRDGIVRI
FT WDVRNPELLNNQFGTMPSLTIACMCKQGQTDLNDVIQSLTDLGLVYTAKYPNMSDLEKL
FT TQAHPILGVIEPKKSAINISGYNFSLSAAVKAGACLIDGGNMLETIRVSARNLDGILKA
FT TLKVKRSLGMFVSDTPGDRNPYENLLYKLCLSGEGWPYIASRTSILGRAWDNTTVDLSG
FT DGTQAPKPAGGNSTRVAQAQGMSAGLTYSQTMELKDCMLQLDPNAKTWVDIEGRAEDPV
FT EVAIYQPSNGQYIHFYREPTDIKQFKQDAKHSHGIDIQDLFSVQPGLTSAVIEGLPRNM
FT VLTCQGVDDIRKLLDSQGRRDIKLIDVSMQKEEARKYEDSIWDEYKHLCTMHTGIVTQK
FT KKRGGKEEVTPHCALMDCLMFEAATVGSSKLTTPRPVLSKDLVFRMSTPKVVL"
XX
SQ Sequence 3383 BP; 874 A; 839 C; 701 G; 969 T; 0 other;
eu914103 Length: 3383 31-JUL-2009 Type: N Check: 7417 ..
1 atttttggtt gcgctttgct ttgttcacaa attagtgatc aagaaatggg
51 tcagattgtg accttctttc aggaagtgcc acatataata gaggaagtga
101 tgaatatagt cctcataact ctatcactct tggccattct aaaaggaatc
151 tacaacatca tgacctgcgg catcattggc ctcctgacat tcctcttttt
201 gtgtgggaga tcctgctcaa gcatctataa agacaattat cagtttctct
251 cactggatct ggatatgtca ggactcaatg caacaatgcc tctctcttgc
301 tcaaagaaca attcacacca ctacatacaa gtgaggaacg atacagggct
351 agagttaact ctcacaaaca ccagcctctt ggatcacaag ttttgtaacc
401 tttcagatgc tcacaagagg aacctctatg acaaggcttt aatgtcaatc
451 gtaacaacat tccacctcaa tatccctaat ttcaatcagt atgaggtcat
501 gtcttgtgac ttcaatggtg ggaaaatcac tgtccagtac aacctatcgc
551 actcatccta tgttgatgct gcaaaccact gtggaaccat cgccaatggt
601 atcatggata cctttaggag gatgtactgg tccaatgcac tgtcaccttc
651 tgaatacatc tctggaacaa catgcatcca gacagcatat cagtacttga
701 tcattcagaa cacaacgtgg gaggatcact gtgttttctc caggccatcc
751 cccatgggat tccttagcct attatctcaa cggacaaaga acttttacat
801 atcaaggagg ctgttgggct tgttcacttg gactctaagt gattctgaag
851 gaaatgatat gcctggtggc tactgtctga caagatctat gctaataggg
901 atggacctga agtgctttgg caacactgct gttgcgaagt gcaatcaaca
951 acatgatgaa gaattctgtg atatgctcag attatttgat ttcaacaagc
1001 aagccatctc aaggcttaag tcagaagcac agcagagcct aaacctaata
1051 acaaaggcag tgaactcatt gatcaatgat cagctgataa tgaaaaatca
1101 tcttagggat ttgatgggga ttccttattg caattataca aaattttggt
1151 acttgaacga cacgaggtca ggcgccactt cgctgccaag atgttggttg
1201 atttctaatg ggtcttactt aaatgaaact caatttagta gggacataga
1251 gcaggaggcc aacaacatgc tgacagatat gttaaggaaa gaatatgaga
1301 aaaggcaaag cacaacacca cttggtttag tggacctctt tgtcttctct
1351 acaagcttct atcttataag tgtatttttg cacctcatta aaatcccaac
1401 acatcgacat ataagaggca agccctgccc caaaccacac aggattaatc
1451 acatggcaat ctgctcatgt ggcttttaca aacaacctgg catcccaact
1501 caatggaaga gatagtccga tggaccctcc gagacgcacc gcccgaggcg
1551 gtgcgtctcg ggggcccgcc ggcccccgca gcccaccacc ttgcggtggt
1601 gggctgcggg ggtgtccatt tacaggacaa cctttggtgt gctcatccta
1651 aagaccagat ccttgctcag cactggcctt ggtgttgtca gcttcgaact
1701 ccccacagta gcggcctcaa acattagaca gtccatcaag gcacaatggg
1751 gagtcacttc ctccttgcca cccctctttt tcttctgagt gactatgcct
1801 gtgtgcatag tgcagaggtg cttgtactca tcccagatgc tgtcttcata
1851 tttccttgcc tcttctttct gcatagacac atcgatcaat ttgatgtctc
1901 ttctcccttg tgagtccaac agcttcctta tgtcatcaac accttggcag
1951 gtgagcacca tgtttctagg tagcccctct ataacagcac ttgtcagccc
2001 tggctgaaca gagaacaagt cttggatgtc aatcccatga gaatgttttg
2051 cgtcctgctt gaattgcttg atgtcagtgg gttctctata aaagtgaatg
2101 tactgcccgt tggatggctg atatatggcc acttcaacag ggtcctcagc
2151 tctaccctct atatcgaccc aggttttggc atttgggtcc aattgcagca
2201 tgcagtcctt cagctccatt gtctgagaat aggttaatcc agctgacatg
2251 ccctgtgcct gtgcaaccct ggtagaattg cctccagcag gcttgggtgc
2301 ctgtgtcccg tccccactta ggtcaactgt tgtgttgtcc catgccctcc
2351 cgaggatgga tgttcttgat gcaatgtagg gccaaccctc cccagagaga
2401 cacaacttgt aaaggagatt ctcataggga ttcctatccc ctggcgtgtc
2451 tgagacgaac atgcccaaag acctctttac ctttagggta gctttgagga
2501 ttccatcaag gtttctggct gaaaccctga tggtttcaag catgtttcca
2551 ccatcaatca aacatgcacc agccttcaca gctgcagaca ggctgaagtt
2601 gtatccagat atgtttatgg cacttttttt gggttctata actcccagga
2651 ttgggtgtgc ttgggtcagt ttctccagat cagacatatt cggatatttt
2701 gctgtgtaca caagaccaag gtctgttaac gactggatga catcatttaa
2751 gtcagtctga ccttgtttgc acatgcatgc tattgttaga cttggcatcg
2801 tgccaaactg attgttaagc aattctgggt ttctaacatc ccagattctt
2851 acaatgccat ctctaggtgg ctccctaccc agtggaccac ctcccattcc
2901 aaccatttgc aacagaacct ttctttgttc taattgttgt gctgtcagat
2951 ttcccatgta gacacctgct gccagcggcc tttcacttct gatgaccttg
3001 gctttgagtc tgtccaagtc ggctgcaaga acaagcaagt catcaggagt
3051 taatgttcca acccttaaga cattcttttg ctgagtggat ttcaactcaa
3101 caagattgtt aacagcctga tttagatctc ttaatctttt tagatctgag
3151 tcatccctct tttctttcct catcaacctc tgcacattgc tgacctctga
3201 gaaatccagc ccgtgaagaa gggcttgagc atccttgatg acttgcactt
3251 tcacattcgt gcagaagcct gagagctctc tccttagact ctgagtccaa
3301 aggaaagatt tcacctcctt tgagttagac atcttcacac cttgttcctc
3351 agcaacttga tctgcaattg gcgcagtcaa taa