Sequence of DPV Pepino mosaic virus

Pepino mosaic virus isolate CQC1-5 coat protein (CP) gene, complete cds.

ACC No: EU915701

Dated: 2008-08-25 | Length: 714 | CRC: 2088922885

                
ID   EU915701; SV 1; linear; genomic RNA; STD; VRL; 714 BP.
XX
AC   EU915701;
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DT   25-AUG-2008 (Rel. 96, Created)
DT   25-AUG-2008 (Rel. 96, Last updated, Version 1)
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DE   Pepino mosaic virus isolate CQC1-5 coat protein (CP) gene, complete cds.
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KW   .
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OS   Pepino mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC   Potexvirus.
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RN   [1]
RP   1-714
RA   Janssen D.;
RT   "Molecular characterization of Pepino mosaic virus from Almeria, Spain";
RL   Unpublished.
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RN   [2]
RP   1-714
RA   Janssen D.;
RT   ;
RL   Submitted (22-JUL-2008) to the EMBL/GenBank/DDBJ databases.
RL   Virology, IFAPA (CAP, Junta de Andalucia), Autovia del Mediterraneo km 420,
RL   La Mojonera, Almeria 04745, Spain
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FH   Key             Location/Qualifiers
FH
FT   source          1. .714
FT                   /organism="Pepino mosaic virus"
FT                   /specific_host="tomato"
FT                   /isolate="CQC1-5"
FT                   /mol_type="genomic RNA"
FT                   /country="Spain"
FT                   /collection_date="Mar-2007"
FT                   /db_xref="taxon:112229"
FT   gene            1. .714
FT                   /gene="CP"
FT   CDS             1. .714
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="ACH43123.1"
FT                   /translation="MENQPTASNPSDAPPTAAQAGAQSPADFSNPNTAPSLSDLKKIKY
FT                   VSTVTSVATPAEIEALGKIFTAMGLAANETGPAMWDLPRAYADVQSSKSAQLIGATPSN
FT                   PALSRRALAAQFDRINITPRQFCMYFAKIVWNILLDSNVPPANWAKLGYQEDTKFAAFD
FT                   FFDGVTNPASLQPADGLIRQPNEKELAAHSVAKYGALARQKISTGNYITTLGEVTRGHM
FT                   GGANTMYAIDAPPEL"
XX
SQ   Sequence 714 BP; 194 A; 196 C; 145 G; 179 T; 0 other;

eu915701 Length: 714  25-AUG-2008  Type: N  Check: 9574  ..

       1  atggaaaacc aacctacagc ttctaaccca tcagatgcac caccaactgc
      51  tgctcaagct ggcgcccaga gcccagccga cttctcaaat cctaatacag
     101  ctccttccct aagtgatttg aagaagatca aatacgtgtc aactgtcact
     151  tcagttgcca cgcctgctga aattgaggcc cttggcaaga tctttactgc
     201  catgggttta gcagccaatg agaccggacc tgccatgtgg gacctccctc
     251  gtgcttatgc tgatgtgcaa agttcaaaat ctgcacaact tataggtgcc
     301  acaccatcca accctgcttt gtctagacgt gcacttgctg cacagtttga
     351  tcgtatcaat atcacaccca gacaattctg catgtatttt gcaaaaattg
     401  tttggaacat actgttagac agcaatgtgc cacctgccaa ctgggcaaaa
     451  ttgggctatc aggaagatac caagtttgct gcttttgact tctttgatgg
     501  agtcacaaac ccagctagtc tacagcctgc agatggccta attaggcagc
     551  ccaatgaaaa agagcttgct gctcactcgg ttgctaaata tggtgccctt
     601  gcccgccaga aaatatccac tggtaactac atcaccaccc ttggtgaagt
     651  tacacgtggt cacatgggcg gcgccaacac tatgtacgca attgatgcac
     701  ctcctgaact ttaa