Sequence of DPV Narcissus latent virus
Narcissus latent virus polyprotein gene, partial cds.
ACC No: FJ024083
Dated: 2008-09-17 | Length: 1759 | CRC: 454961503
ID FJ024083; SV 1; linear; genomic RNA; STD; VRL; 1759 BP.
XX
AC FJ024083;
XX
DT 17-SEP-2008 (Rel. 97, Created)
DT 17-SEP-2008 (Rel. 97, Last updated, Version 1)
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DE Narcissus latent virus polyprotein gene, partial cds.
XX
KW .
XX
OS Narcissus latent virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Macluravirus.
XX
RN [1]
RP 1-1759
RA Monger W.A., Nixon T.P.;
RT "Viruses found in UK Narcissus";
RL Unpublished.
XX
RN [2]
RP 1-1759
RA Monger W.A., Nixon T.P.;
RT ;
RL Submitted (14-AUG-2008) to the EMBL/GenBank/DDBJ databases.
RL Plant Health, Central Science Laboratory, Sand Hutton, York YO41 1LZ, UK
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FH Key Location/Qualifiers
FH
FT source 1. .1759
FT /organism="Narcissus latent virus"
FT /specific_host="Narcissus cultivar Missouri"
FT /mol_type="genomic RNA"
FT /country="United Kingdom"
FT /isolation_source="leaves"
FT /collection_date="2008"
FT /db_xref="taxon:48200"
FT CDS <1. .1531
FT /codon_start=2
FT /product="polyprotein"
FT /protein_id="ACH88050.1"
FT /translation="STVVDNTLVLMLSFYYAYARKTNDLTFDRIDEDFCFVCNGDDNKF
FT SLSPDFVAKHGGSFENEINELGLTYEFDDLTPDIMKNPYMSLTIVQVGERIGFQLNPER
FT IVGIVQWIKKGGVLHAAQAAFAAMVEAFNDPSLFTVMHPYLVWLLVTYKDVLLYAQEND
FT LGSVCYMDPCQVFALHYGSSEGLESVDFESDNESANDADDDVTPSLELQMDVESLIPEK
FT GKNAKNTNKDEQSKRTDATAQGESSSPLKSSTEEAANRGDTNPPQGDPLVDDEIVEWVI
FT PKMSSNIVTSPVPVVNGKKLWKRGILKNMPKIMFSTTSTMATRVQLTSWVEEVKKSLAL
FT KTDDAWTVVITNWCIWCANNGTSSEIDTSQNMEICDSFGKVQEVPIEIFVNPAVENGGL
FT RKIMRHFYGITYEILKVGKQMTAWGNKRGFTEKSMIPYAFDYYVVTNTTPKTVREQLAQ
FT SKAAAIGSGTVRKMILDGNIQGSHASYERHVDTDNSEYEHGSSVDQRPYLT"
FT mat_peptide <1. .637
FT /product="NIb"
FT mat_peptide 638. .1528
FT /product="coat protein"
FT 3'UTR 1532. .>1759
XX
SQ Sequence 1759 BP; 511 A; 351 C; 418 G; 479 T; 0 other;
fj024083 Length: 1759 17-SEP-2008 Type: N Check: 3616 ..
1 tagcactgtt gtcgacaaca ccttggtgtt aatgctttcc ttttattatg
51 catatgcaag gaaaactaat gatttgactt tcgaccgcat tgatgaagat
101 ttctgcttcg tttgcaatgg tgatgacaac aaattttcgc tttcgcccga
151 ttttgttgcc aaacacggtg gttcgtttga aaatgagata aacgagctcg
201 gtctcactta tgaatttgat gatctcacgc cagacataat gaagaaccca
251 tacatgagcc tgacgatagt tcaggtgggt gagcgcattg gcttccagct
301 caaccctgaa cgaattgttg gcattgtaca gtggatcaag aaagggggcg
351 ttctgcatgc agcccaagca gcatttgcag ccatggtaga agcattcaat
401 gatccaagtc tattcactgt tatgcaccca tatttggtgt ggctcttagt
451 cacttataag gatgttttgt tgtacgctca agagaacgac ttgggatcag
501 tttgttacat ggacccatgt caggtgttcg cactacacta tgggtcatct
551 gaaggtttgg agagcgtgga tttcgagagt gacaacgaga gtgcaaatga
601 tgctgatgat gacgtcacgc ccagcttgga actccagatg gatgtcgaga
651 gtctgattcc tgagaaaggg aaaaacgcta agaacacgaa caaagacgaa
701 caaagcaagc gaactgatgc gactgctcaa ggcgagtcaa gtagccctct
751 caagagcagc acagaggagg ccgccaaccg aggtgacaca aatccaccac
801 aaggagatcc tttagttgat gatgagatag tcgaatgggt cattccaaaa
851 atgagttcaa acattgtgac ctcaccagtg ccagttgtca atggcaagaa
901 actgtggaag cgaggaatcc tgaaaaacat gccgaaaata atgttcagca
951 caacttcaac catggcaact cgagttcaac taacatcatg ggttgaggaa
1001 gttaagaaat cactcgccct caaaacagat gatgcgtgga cggttgtaat
1051 cacaaattgg tgcatttggt gcgctaacaa tggcacctca tctgaaattg
1101 acacatcaca gaatatggaa atttgtgata gttttggaaa agttcaagaa
1151 gtccccatcg aaatttttgt taatccagct gttgagaatg gtgggctacg
1201 gaaaatcatg aggcattttt atggcataac atatgaaatt ttgaaggttg
1251 gtaagcaaat gacagcctgg gggaacaaga ggggttttac tgagaaatcg
1301 atgatcccct acgcttttga ctactatgtc gtcacaaaca caacaccgaa
1351 gactgtgcgt gagcaattgg ctcaatcgaa agcagcagca attggctcag
1401 gcacggtgag aaagatgatt cttgatggaa acatacaagg gtcacacgct
1451 agttatgaac gacatgtcga cacggacaat agcgaatatg agcatggttc
1501 cagtgttgac cagaggccct atcttactta agttctgcgt tcttgaacgt
1551 ttgaacttaa taatttatat ttgcattata tgagttttct ttgaagctta
1601 ttttctctct tttctctttg agctttaagg gttaaatggg ggtttgtttg
1651 ccattgttcc tccaatgccc cgaaatggca agctcattct agcgatgttt
1701 atctttaaag agttttaatc gctttcacct aagcctgatc tggatggtcg
1751 gctgcgctt