Sequence of DPV Cucumber mosaic virus

Cucumber mosaic virus isolate SDTA coat protein (CP) gene, complete cds.

ACC No: FJ403473

Dated: 2009-12-01 | Length: 777 | CRC: 682760239

                
ID   FJ403473; SV 1; linear; genomic RNA; STD; VRL; 777 BP.
XX
AC   FJ403473;
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DT   01-DEC-2009 (Rel. 103, Created)
DT   01-DEC-2009 (Rel. 103, Last updated, Version 1)
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DE   Cucumber mosaic virus isolate SDTA coat protein (CP) gene, complete cds.
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KW   .
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OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Bromoviridae;
OC   Cucumovirus.
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RN   [1]
RP   1-777
RA   Sun X.;
RT   "Sequence Analysis of CP gene and Subgroup Identification of CMV from
RT   Pepper in Guangdong and Shandong";
RL   Unpublished.
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RN   [2]
RP   1-777
RA   Sun X.;
RT   ;
RL   Submitted (17-OCT-2008) to the EMBL/GenBank/DDBJ databases.
RL   College of Horticulture, Shandong Agriculture University, Daizong Road 61,
RL   Taian, Shandong 271018, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .777
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /host="hot pepper"
FT                   /isolate="SDTA"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:12305"
FT   gene            1. .657
FT                   /gene="CP"
FT   CDS             1. .657
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /note="capsid protein"
FT                   /protein_id="ACQ99348.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSASSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDNGSYYGKRLLLPDSVTEFDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVTAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGVLPV"
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SQ   Sequence 777 BP; 179 A; 208 C; 180 G; 210 T; 0 other;

fj403473 Length: 777  01-DEC-2009  Type: N  Check: 4958  ..

       1  atggacaaat ctgaatcaac cagtgctggt cgtaaccgcc gacgtcgtcc
      51  gcgtcgtggt tcccgctccg cttcctcctc cgcggatgcc aactttagag
     101  tcctgtcgca acagctttcg cgacttaata agacgttagc agctggtcgt
     151  ccaactatta accacccaac ctttgtgggt agtgaacgtt gtaaacctgg
     201  atacacgttc acctcgatta ccctgaagcc tccaaaaata gacaacgggt
     251  cttattatgg taaaaggttg ttattacctg attcagtcac ggaattcgat
     301  aagaagcttg tttcgcgcat tcaaattcga gttaatcctt tgccgaaatt
     351  tgattctacc gtgtgggtga cagtccgcaa agttcctgcc tcatcggact
     401  tatccgttac cgccatctct gctatgttcg cggacggagc ctcaccggta
     451  ctggtctatc agtacgccgc atccggagtc caagccaaca ataaactgtt
     501  gtatgatctt tcggcgatgc gcgctgatat tggcgacatg cgaaagtacg
     551  ccgttctcgt gtattcaaaa gacgatgctc tcgagacgga tgagttagta
     601  cttcatgtcg acatcgagca ccaacgcatt cccacatctg gggtgctccc
     651  agtttgaact cgtgttttcc cagaatcctc cctccgactc tgtggcggga
     701  gctgagttgg tagtattgct ataaactgcc tgaagtcact aaacgctttg
     751  cggtgaacgg gttgtccatc cagctta