Sequence of DPV Potato leafroll virus

Potato leafroll virus isolate Mashhad coat protein gene, complete cds.

ACC No: FJ481108

Dated: 2010-03-22 | Length: 627 | CRC: 1945351364

                
ID   FJ481108; SV 1; linear; genomic RNA; STD; VRL; 627 BP.
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AC   FJ481108;
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DT   30-DEC-2008 (Rel. 98, Created)
DT   22-MAR-2010 (Rel. 104, Last updated, Version 2)
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DE   Potato leafroll virus isolate Mashhad coat protein gene, complete cds.
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KW   .
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OS   Potato leafroll virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC   Polerovirus.
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RN   [1]
RP   1-627
RA   Pooramini N., Heydarnejad J., Massumi H.;
RT   "Incidence and Molecular Analysis of Potato leafroll virus in Iran";
RL   J. Phytopathol. 158(3):182-185(2010).
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RN   [2]
RP   1-627
RA   Heydarnejad J., Pooramini N., Massumi H.;
RT   ;
RL   Submitted (22-NOV-2008) to the EMBL/GenBank/DDBJ databases.
RL   Plant Protection Department, Shahid Bahonar University of Kerman, 22 Bahman
RL   Ave., Kerman 7616914111, Iran
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FH   Key             Location/Qualifiers
FH
FT   source          1. .627
FT                   /organism="Potato leafroll virus"
FT                   /host="Solanum tuberosum"
FT                   /isolate="Mashhad"
FT                   /mol_type="genomic RNA"
FT                   /country="Iran"
FT                   /collection_date="2005"
FT                   /db_xref="taxon:12045"
FT   CDS             1. .627
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q84838"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="UniProtKB/TrEMBL:Q84838"
FT                   /protein_id="ACK99524.1"
FT                   /translation="MSTVVVKGNVNGGVQQPRRRRRQSLRRRANRVQPVVMVTAPGQPR
FT                   RRRRRRGGNRRSRRTGVPRGRGSSETFVFTKDNLMGNSQGSFTFGPSLSDCPAFKDGIL
FT                   KAYHEYKITSILLQFVSEASSTSSGSIAYELDPHCKVSSLQSYVNKFQITKGGAKTYQA
FT                   RMINGVEWHDSSEDQCRILWKGNGKSSDTAGSFRVTIRVALQNPK"
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SQ   Sequence 627 BP; 178 A; 161 C; 163 G; 125 T; 0 other;

fj481108 Length: 627  22-MAR-2010  Type: N  Check: 8472  ..

       1  atgagtacgg tcgtggttaa aggaaatgtc aatggtggtg tacaacaacc
      51  aagaaggcga agaaggcaat cccttcgcag gcgcgctaac agagttcagc
     101  cagtggttat ggtcacggcc cctgggcaac ccaggcgccg aagacgcaga
     151  agaggaggca atcgccgctc aagaagaact ggagttcccc gaggacgagg
     201  ctcaagcgag acattcgtgt ttacaaagga caacctcatg ggcaactccc
     251  aaggaagttt caccttcggg ccgagtctat cagactgtcc ggcattcaag
     301  gatggaatac tcaaggccta ccatgagtat aagatcacaa gcatcttact
     351  tcagttcgtc agcgaggcct cttccacctc ctccggttcc atcgcttatg
     401  agttggaccc ccattgcaaa gtatcatccc tccagtccta cgtcaacaag
     451  ttccaaatta cgaagggcgg cgccaaaact tatcaagcgc ggatgataaa
     501  cggggtagaa tggcacgatt cttctgagga tcagtgccgg atactgtgga
     551  agggaaatgg aaaatcttca gataccgcag gatccttcag agtcaccatc
     601  agggtggctt tgcaaaaccc caaatag