Sequence of DPV Mertensia leaf curl virus
Mertensia leaf curl virus isolate NTR8 replication-associated polyprotein (RP) gene, partial cds; and coat protein (CP) gene, complete cds.
ACC No: FJ713524
Dated: 2009-10-23 | Length: 2190 | CRC: 1455007807
ID FJ713524; SV 2; linear; genomic RNA; STD; VRL; 2190 BP.
XX
AC FJ713524;
XX
DT 15-MAR-2009 (Rel. 100, Created)
DT 23-OCT-2009 (Rel. 102, Last updated, Version 2)
XX
DE Mertensia leaf curl virus isolate NTR8 replication-associated polyprotein
DE (RP) gene, partial cds; and coat protein (CP) gene, complete cds.
XX
KW .
XX
OS Mertensia leaf curl virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales;
OC Tymoviridae; unclassified Tymoviridae.
XX
RN [1]
RP 1-2190
RA Robertson N.L.;
RT "A new tymovirus isolated from an indegenous Boraginaceae plant species in
RT south central Alaska";
RL Unpublished.
XX
RN [2]
RP 1-2190
RA Robertson N.L.;
RT ;
RL Submitted (06-FEB-2009) to the EMBL/GenBank/DDBJ databases.
RL Agricultural Research Service, United States Department of Agriculture, 533
RL E. Fireweed Ave., Palmer, AK 99645, USA
XX
RN [3]
RC Sequence update by submitter
RP 1-2190
RA Robertson N.L., Brown K.L.;
RT ;
RL Submitted (21-OCT-2009) to the EMBL/GenBank/DDBJ databases.
RL Agricultural Research Service, United States Department of Agriculture, 533
RL E. Fireweed Ave., Palmer, AK 99645, USA
XX
CC On Oct 21, 2009 this sequence version replaced gi:224755429.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2190
FT /organism="Mertensia leaf curl virus"
FT /host="Mertensia paniculata"
FT /isolate="NTR8"
FT /mol_type="genomic RNA"
FT /country="USA:N. Trunk Rd."
FT /collection_date="05-Jul-2006"
FT /db_xref="taxon:620841"
FT gene <1. .1530
FT /gene="RP"
FT CDS <1. .1530
FT /codon_start=1
FT /gene="RP"
FT /product="replication-associated polyprotein"
FT /note="RNA-dependent RNA polymerase"
FT /protein_id="ACX94288.1"
FT /translation="FTHHTPVYPGENFETLASHFLPAHDPDIKEILWKDQASSQFAWFD
FT RPFELSCQPSSLLAPKHSPSSDPTLLPASISKRLRFRPSSHPHSLTSQDVILGNILYSS
FT LCRAYSRSPTSSVPFNPTLFADCISLNEYAQLSSKTKATIVANHARSDPDWRHTVVKIF
FT AKAQHKVNDGSIFGDWKACQTLALMHDYVILTLGPVKKYQRLFDASDRPSHIYTHCGKS
FT PRDLSLWCQNHLSDSVKYANDYTAFDQSQHGESVILEALKMKRLNIPSHLILLHIHLKT
FT HVETQFGPLTCMRLTGEPGTYDDNTDYNLAVIYSQFEMKSTPVAVSGDDSLLDSLPPER
FT AEWPIISQFLHLRFKPELTLHPLFCGYFAGKNGAVRNPLAVFAKLMIAWDDSALEERRL
FT SYLTEFATGHLLGDSFWNVIPPSHRIYQSACFDFFCRFAKKHEKELLSSEPFSPSSLQK
FT ITSSIRWLSKQALSSLPLSILRKLSNTSSFPNHPDNPEVSQLESELLPSLQ"
FT gene 1539. .2105
FT /gene="CP"
FT CDS 1539. .2105
FT /codon_start=1
FT /gene="CP"
FT /product="coat protein"
FT /db_xref="GOA:C0LJR6"
FT /db_xref="InterPro:IPR000574"
FT /db_xref="UniProtKB/TrEMBL:C0LJR6"
FT /protein_id="ACN62330.1"
FT /translation="MEIEGVLAPQPSINTKPSLLPPITGSAPPAISYPFQVTIASLGMA
FT DGADSVSIASSSVIANYTSLYRHAVLKNLKATIHPNLTAPAFPTSVSLVWVPANSVATP
FT QDILNVYGGQCFCIGGTINSVSPLEVPANLTNLNSTVKASTTFTDTPKLLYSSTAQTTA
FT PTKPTCYLTISGVVELSSPLLQASQ"
XX
SQ Sequence 2190 BP; 485 A; 774 C; 382 G; 549 T; 0 other;
fj713524 Length: 2190 23-OCT-2009 Type: N Check: 680 ..
1 ttcactcacc acaccccagt ttaccccggc gagaattttg agactcttgc
51 gtctcacttc cttccagccc atgatcctga catcaaggaa attctctgga
101 aggaccaagc gagctcccag tttgcctggt ttgacagacc atttgagctc
151 tcctgtcagc cctctagcct cctcgccccc aaacactccc catcttctga
201 ccccaccctg ctcccagcct ccatatccaa gcgtctccgc ttcagaccct
251 cctcccaccc ccactccttg acctctcagg atgtcatcct cggcaacatt
301 ctgtattcct ctctttgccg agcctattcc agaagcccga caagctcggt
351 cccattcaat cctaccctct ttgctgactg catctccctc aacgagtatg
401 cacaactttc ctcaaagacg aaagccacaa tcgttgccaa ccacgctcgc
451 tctgaccctg attggcgaca cacagtggtt aaaatctttg ccaaagctca
501 gcacaaagtc aatgatggat caatctttgg agactggaaa gcatgtcaga
551 ccctggcctt gatgcatgat tatgtcatcc tcaccctcgg ccccgtcaag
601 aagtaccaac gcctctttga cgcatctgac agaccttccc acatttacac
651 tcattgtggc aaatccccaa gagatctctc tctgtggtgt caaaatcacc
701 tgtccgactc ggtcaagtac gccaatgact acactgcctt tgaccagtcc
751 cagcacggag aatctgtcat cttagaggct ttgaaaatga agcgcctcaa
801 cattccatcc catctcatac tcctccacat ccatctcaaa actcatgttg
851 agacccagtt tggtcccctg acctgcatgc gtctgaccgg tgagccaggc
901 acttatgatg acaacactga ttacaatctt gctgtcatct actcccagtt
951 tgagatgaaa tccactcccg tcgctgtatc cggcgatgac tccctccttg
1001 actcactccc tcccgagaga gctgaatggc ccatcatttc ccagtttctc
1051 catctcagat tcaaacctga gctgactctc cacccactct tctgcgggta
1101 ttttgccggg aaaaatggtg ctgtccgcaa tcctctcgcg gtctttgcca
1151 aactcatgat agcttgggac gactctgccc tagaggaacg aaggctgagt
1201 tacctcactg agtttgccac tggtcacctc ctcggggatt ctttctggaa
1251 tgtgatccct ccttctcatc gcatttacca gagtgcctgc tttgacttct
1301 tctgccgttt cgccaagaaa catgaaaaag agctcctctc ctctgagccc
1351 ttcagtcctt cctctcttca gaagatcacc tccagcatcc gctggctgtc
1401 caagcaagcc ctcagctctc tccccctttc catcttgaga aagctctcca
1451 acacctcctc cttcccaaac caccccgaca atcccgaggt ttcccagcta
1501 gagtctgaat tgcttccctc tttgcaatag actcgatcat ggaaattgaa
1551 ggcgtcctag ctcctcaacc ctccatcaac accaagccct ctcttctccc
1601 acccatcact ggatctgcac cacccgcaat ctcttacccc ttccaagtga
1651 caatagcatc tctaggcatg gccgacggag ctgattccgt cagcattgcc
1701 tccagttctg ttattgctaa ctacacctcc ctctaccggc atgccgtctt
1751 gaagaatctc aaggctacca tccaccccaa cctcactgct ccggctttcc
1801 cgaccagtgt ttcccttgtc tgggtcccgg caaactctgt cgccaccccg
1851 caagacattc tcaacgttta cggaggccag tgcttctgca ttggtggcac
1901 catcaactcc gtgagccctc ttgaggttcc agccaacctt accaacctca
1951 actccacagt caaggcttca accaccttca ctgatacccc caaacttctc
2001 tactcttcca ccgcgcagac aactgcgcca accaaaccca catgctacct
2051 caccatctca ggtgtcgtag aactctcctc tcctcttctt caagcctctc
2101 agtaggctca ggtcgccagt gcgacaccca ttcacacaca atgggcattg
2151 gggtgcaact cccccgtcta tcctgaacgt catcaggtcc