Sequence of DPV Quaranfil virus
Quaranfil virus isolate EG T 377 polymerase PB1 (PB1) gene, complete cds.
ACC No: FJ861695
Dated: 2009-11-09 | Length: 2386 | CRC: -534246069
ID FJ861695; SV 1; linear; viral cRNA; STD; VRL; 2386 BP.
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AC FJ861695;
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DT 09-NOV-2009 (Rel. 102, Created)
DT 09-NOV-2009 (Rel. 102, Last updated, Version 1)
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DE Quaranfil virus isolate EG T 377 polymerase PB1 (PB1) gene, complete cds.
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KW .
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OS Quaranfil virus
OC Viruses; ssRNA negative-strand viruses; Orthomyxoviridae;
OC unclassified Orthomyxoviridae.
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RN [1]
RP 1-2386
RX DOI; 10.1128/JVI.00677-09.
RX PUBMED; 19726499.
RA Presti R.M., Zhao G., Beatty W.L., Mihindukulasuriya K.A., da Rosa A.P.,
RA Popov V.L., Tesh R.B., Virgin H.W., Wang D.;
RT "Quaranfil, Johnston Atoll, and Lake Chad viruses are novel members of the
RT family Orthomyxoviridae";
RL J. Virol. 83(22):11599-11606(2009).
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RN [2]
RP 1-2386
RA Presti R.M., Wang D., Virgin H.W.;
RT ;
RL Submitted (23-MAR-2009) to the INSDC.
RL Medicine, Washington University, 660 S. Euclid, St. Louis, MO 63110, USA
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FH Key Location/Qualifiers
FH
FT source 1. .2386
FT /organism="Quaranfil virus"
FT /host="Argas reflexus"
FT /isolate="EG T 377"
FT /mol_type="viral cRNA"
FT /country="Afghanistan"
FT /collection_date="Sep-1968"
FT /db_xref="taxon:688436"
FT gene 33. .2366
FT /gene="PB1"
FT CDS 33. .2366
FT /codon_start=1
FT /gene="PB1"
FT /product="polymerase PB1"
FT /db_xref="GOA:D0QX26"
FT /db_xref="InterPro:IPR001407"
FT /db_xref="InterPro:IPR007099"
FT /db_xref="UniProtKB/TrEMBL:D0QX26"
FT /protein_id="ACY56282.1"
FT /translation="MERLNSFLVSTLIRDGMSREEKEKLVGPYPVGIENTGLGAVSFLY
FT KYVNVPPLAVGAPAPKTAESVLRSFEYNRLPDNGKGLRPRQYWMETDGPYPYDVTCANF
FT HLSAAQEMHKSFLREHHAVIDKVTEAMYQRLKTTNADILTKGKQTWDPINKRSVPSAAA
FT FKEITTVLRTYLKLVGFSVLDFVEAFHRMLMLPEMVYNRRVNAEKTVRKRKGGVITLEK
FT KAVVVLETVHLTRNEDVRETVMGWATAFCSYLKSKERGKLKRRAIASANPILRMFLWIV
FT EELHLELGKQEEMVSSTISIGGEEKRAKIIATPDGLSLNEFNIQATEDATKWNECLAPE
FT NFCLMHEIWWSHSIREEMGLPKPPESAEIMRQIFQQAFYLLSHKRIYLGKGHLIHNQTR
FT AALLQWKEDHEKYMNEKTLEWFRKIKEHLDSEGYVKAPFGMLMGMLNAGSTTLALPATK
FT WRLQPGMDCKTVRSSDDSMTVFSGKTRQLLMENINRFYDNLKLLGINISQKKTRFFQLK
FT FGEYTSAYQDGDFTAQYGVGTAALRPEGSNPPDDFHSVASQTATSLRSGTVNFVGAQFR
FT LGIGVDNVRRLYKIDRTPGKRQGVPDSALVLSDGGPSPWNFSNCHLPELALKWITHEQN
FT PQATRYLERVMNPNNPFTADAAEITSFSRELNTLVETSLELPRNLFHTLKRFNATQKSL
FT LRKGDNDFMKSCNLAMQLFEEVIPASLLQVPSGPQPMSQVMADVLRAQASALRSVGVHF
FT TEEEMEEIRGALNTLEHDSNIDFE"
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SQ Sequence 2386 BP; 694 A; 533 C; 618 G; 541 T; 0 other;
fj861695 Length: 2386 09-NOV-2009 Type: N Check: 3736 ..
1 gcaatcacaa tctctttgct tccttcttaa taatggagcg cctgaacagc
51 tttctagtgt ctaccctcat aagagatggt atgagcaggg aggaaaaaga
101 gaaattagta ggaccatatc ctgttgggat tgaaaacact ggtctggggg
151 cagtttcctt cttgtataag tatgtgaatg tcccccctct tgcagtaggt
201 gccccagccc ccaagactgc tgagtcggtg ttgcgctcct ttgagtacaa
251 tcgcctccct gacaatggga aagggttgag gccgagacaa tactggatgg
301 aaactgatgg cccctaccca tatgatgtga cttgtgcaaa cttccacctt
351 tctgctgcac aagaaatgca caagagtttc ctgagggaac atcacgctgt
401 catcgacaaa gttacagagg ccatgtatca gcggctcaaa actaccaatg
451 cggacattct aactaagggc aaacaaactt gggaccccat caacaaaaga
501 agtgttccca gcgccgccgc tttcaaagag ataaccactg tgcttcgaac
551 atacctcaag cttgtagggt tttcagtcct tgactttgtg gaggctttcc
601 acaggatgtt gatgctacct gagatggtct ataataggcg ggtaaatgct
651 gagaagacag taagaaagcg gaaggggggt gtgataacac tagaaaagaa
701 agcagtggtg gtactagaga ctgtccacct gacaaggaat gaggatgtga
751 gggagacggt gatgggctgg gccaccgcct tttgctctta tttgaaaagc
801 aaggaaaggg gcaaactaaa aaggagggcg atcgcatccg caaacccaat
851 cctgaggatg ttcttgtgga ttgtcgagga gctccatctg gagctgggta
901 aacaagaaga gatggtcagt tctaccatca gcattggagg tgaagaaaag
951 agagctaaga tcatcgccac accggatggg ctatctctga acgagttcaa
1001 tatccaggcg accgaagatg cgactaagtg gaatgagtgc ctggcaccag
1051 agaatttctg cctgatgcat gagatatggt ggtcccattc tataagggag
1101 gaaatggggc ttcccaagcc tcctgagagc gctgaaatta tgaggcaaat
1151 ttttcaacaa gccttctact tgttgtccca caaaaggatc tacttaggga
1201 agggtcacct gatacacaat cagacaagag cagcactgct gcaatggaag
1251 gaagaccatg agaaatacat gaatgagaaa acgttggagt ggttccggaa
1301 aattaaggaa catttggaca gtgagggcta cgtcaaagcg cctttcggaa
1351 tgcttatggg catgctaaat gcggggagta ccactctggc cttgccggcc
1401 accaagtgga ggctgcaacc tgggatggat tgcaagacag tcaggagcag
1451 tgatgattcc atgactgtct tttcagggaa gaccaggcag ctgctgatgg
1501 agaatataaa ccgattttac gacaatctaa agctactagg gataaacata
1551 tcgcagaaaa agacccggtt cttccaatta aagtttggag agtatacatc
1601 agcataccaa gacggtgact tcactgccca atatggggtt ggaacggctg
1651 ccctaaggcc agaaggaagc aaccctccag atgacttcca ttcagtagcg
1701 tctcagacgg caacatcctt aaggtcaggg actgtcaatt tcgtgggagc
1751 acagtttagg ctgggcattg gagttgacaa tgtaaggagg ctctataaaa
1801 tagaccgtac accagggaag agacaagggg tccctgattc agcccttgtt
1851 ctgtcagatg gtggccccag tccctggaat ttctcaaatt gtcaccttcc
1901 ggaactggca ctaaaatgga tcacgcacga gcagaatcca caagccactc
1951 ggtacttgga gagagtcatg aaccccaata acccatttac cgctgatgcc
2001 gcagagatta ccagcttttc tcgtgaactg aacaccctgg ttgagacctc
2051 cctggaattg ccccgaaatc tcttccacac cctaaaaagg ttcaatgcaa
2101 ctcagaaatc actgttgaga aaaggagaca atgacttcat gaagtcttgc
2151 aatttggcga tgcagttgtt tgaagaggta atacccgcca gtctccttca
2201 agtgccatca ggtccgcagc ccatgagcca agtgatggca gatgtactac
2251 gtgctcaggc cagtgccttg cgaagtgtag gggtccactt tactgaggag
2301 gaaatggaag aaataagagg cgccctcaat acactagagc atgactccaa
2351 cattgacttt gaatgaaaaa gagatttgtg attgct