Sequence of DPV Hosta virus X

Hosta virus X isolate TnMf5 coat protein (CP) gene, complete cds.

ACC No: FJ903397

Dated: 2009-11-18 | Length: 663 | CRC: 1610313961

                
ID   FJ903397; SV 1; linear; genomic RNA; STD; VRL; 663 BP.
XX
AC   FJ903397;
XX
DT   18-NOV-2009 (Rel. 102, Created)
DT   18-NOV-2009 (Rel. 102, Last updated, Version 1)
XX
DE   Hosta virus X isolate TnMf5 coat protein (CP) gene, complete cds.
XX
KW   .
XX
OS   Hosta virus X
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales;
OC   Alphaflexiviridae; Potexvirus.
XX
RN   [1]
RC   Publication Status: Available-Online prior to print
RP   1-663
RX   PUBMED; 19838620.
RA   Fajolu O.L., Wen R.H., Windham A.S., Windham M.T., Moulton J.K.,
RA   Hajimorad M.R.;
RT   "Genetic variability and phylogenetic analysis of hosta virus X";
RL   Arch. Virol. 0:0-0(2009).
XX
RN   [2]
RP   1-663
RA   Fajolu O.L., Wen R.H., Hajimorad M.R.;
RT   ;
RL   Submitted (07-APR-2009) to the EMBL/GenBank/DDBJ databases.
RL   Entomology and Plant Pathology, University of Tennessee, 2431 Joe Johnson
RL   Drive, 205 Ellington Plant Science Building, Knoxville, TN 37996, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .663
FT                   /organism="Hosta virus X"
FT                   /host="Hosta sp."
FT                   /isolate="TnMf5"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:Tennessee"
FT                   /note="collected between August 2007 and March 2008"
FT                   /db_xref="taxon:214439"
FT   gene            1. .663
FT                   /gene="CP"
FT   CDS             1. .663
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="ACY71446.1"
FT                   /translation="MASDAPTPPAAPSPVTFTAPTQEQLTSLALPIISTRLPSPDVLNQ
FT                   ISVKWQELGVPTASISSTAIALCMACYHSGSSGSTLIPGLAPGTTVNYTSLAAAVKSLA
FT                   TLREFARYFAPIIWNYAIEHKIPPANWAAMGYKENTKYAAFDTFDSILNPAALQPTGGL
FT                   IRQPTEEELLAHQANSALHIFDSLRNDFASTDGRVTRGHITSNVNSLNYLPAPEGSS"
XX
SQ   Sequence 663 BP; 167 A; 235 C; 150 G; 111 T; 0 other;

fj903397 Length: 663  18-NOV-2009  Type: N  Check: 5283  ..

       1  atggcaagtg acgcaccaac tccaccagct gccccatctc ccgtgacctt
      51  cactgcacca acacaggaac aactgacgtc cctggccctg cccatcatta
     101  gcacaaggct cccaagcccc gatgtgctca accagatctc agtgaagtgg
     151  caggaactgg gggttcctac ggccagcatt tcgtccacag ccatagcgct
     201  gtgtatggcc tgctaccact cagggtcctc agggagcacc ctcatcccag
     251  gactcgcgcc aggcacaacg gtcaactaca cctccctcgc ggcagcagtg
     301  aagtccctag ccacactcag ggagttcgca aggtacttcg cccccatcat
     351  ctggaattat gcgatcgagc acaagattcc accagccaac tgggcggcga
     401  tgggctacaa agaaaacacg aagtacgcgg ctttcgacac cttcgactcc
     451  atcctcaatc ccgcggcgct gcaacccacg ggaggcctaa tcagacaacc
     501  aacagaggag gagctcctgg cccaccaagc aaactcagcc ctccacatct
     551  tcgattccct gagaaacgac ttcgcctcca ctgacggcag ggtgacaaga
     601  ggacacatca cctccaacgt gaactcactc aactaccttc ctgccccgga
     651  aggctcaagt tga