Sequence of DPV Hosta virus X

Hosta virus X isolate TnFr2 triple gene block protein 1 (TGB1) gene, complete cds.

ACC No: FJ903433

Dated: 2009-11-18 | Length: 696 | CRC: 1838819356

                
ID   FJ903433; SV 1; linear; genomic RNA; STD; VRL; 696 BP.
XX
AC   FJ903433;
XX
DT   18-NOV-2009 (Rel. 102, Created)
DT   18-NOV-2009 (Rel. 102, Last updated, Version 1)
XX
DE   Hosta virus X isolate TnFr2 triple gene block protein 1 (TGB1) gene,
DE   complete cds.
XX
KW   .
XX
OS   Hosta virus X
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales;
OC   Alphaflexiviridae; Potexvirus.
XX
RN   [1]
RC   Publication Status: Available-Online prior to print
RP   1-696
RX   PUBMED; 19838620.
RA   Fajolu O.L., Wen R.H., Windham A.S., Windham M.T., Moulton J.K.,
RA   Hajimorad M.R.;
RT   "Genetic variability and phylogenetic analysis of hosta virus X";
RL   Arch. Virol. 0:0-0(2009).
XX
RN   [2]
RP   1-696
RA   Fajolu O.L., Wen R.H., Hajimorad M.R.;
RT   ;
RL   Submitted (08-APR-2009) to the EMBL/GenBank/DDBJ databases.
RL   Entomology and Plant Pathology, University of Tennessee, 2431 Joe Johnson
RL   Drive, 205 Ellington Plant Science Building, Knoxville, TN 37996, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .696
FT                   /organism="Hosta virus X"
FT                   /host="Hosta sp."
FT                   /isolate="TnFr2"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /note="collected between August 2007 and March 2008"
FT                   /db_xref="taxon:214439"
FT   gene            1. .696
FT                   /gene="TGB1"
FT   CDS             1. .696
FT                   /codon_start=1
FT                   /gene="TGB1"
FT                   /product="triple gene block protein 1"
FT                   /protein_id="ACY71482.1"
FT                   /translation="MATFASFLSSTRPDFERTNTPLTKPLVIHAVAGAGKTTLLRDFLR
FT                   ANPLTNAQTLGTPDCPTLDGAYIRPFSGPVANLVNVLDEYTAQPVTGSWDVLIADPLQH
FT                   YERAKLPHYICKRSHRLCPATARLLRKLGLDIHSYREDESEISFSDIFSGQLEGTVLPL
FT                   TPLCKDLLERHSCPFKCPSEFIGEQDDTITVVSEIPLSKHPDKTALYRALTRHTRRLNV
FT                   LAPPPYPTP"
XX
SQ   Sequence 696 BP; 168 A; 246 C; 148 G; 134 T; 0 other;

fj903433 Length: 696  18-NOV-2009  Type: N  Check: 5448  ..

       1  atggcaacat tcgccagctt cctttcttct actaggcctg acttcgaacg
      51  tactaacact cctctaacca aaccactagt cattcacgcg gtggcaggcg
     101  cgggcaaaac cacactcctc cgcgacttcc tcagggccaa cccactaact
     151  aatgctcaga ctctgggaac accagactgc cccactctgg acggagctta
     201  cataaggcct ttctcaggac cagttgcaaa tctcgtcaac gttcttgacg
     251  aatacacggc gcagcccgtc accggctcct gggatgtcct cattgcagac
     301  cccctccaac actacgagag ggcaaagctc ccacactaca tctgcaagcg
     351  atcacaccgc ctctgcccgg caactgctag actgctgaga aagctcggcc
     401  tcgacattca ctcttaccgg gaggacgagt cggagatctc cttctccgac
     451  atattcagcg gtcaactcga aggcactgtt ctcccgctta ccccactctg
     501  caaagacctt ctagagaggc actcctgccc cttcaaatgc ccatctgagt
     551  tcataggcga gcaggacgac actatcaccg tggtaagcga gattcctctg
     601  agcaagcacc cagacaagac ggccctgtac agggcgctga cgaggcacac
     651  gcggagactc aatgtcctcg ccccaccgcc ttaccccacc ccctaa