Sequence of DPV Rice stripe virus

Rice stripe virus CP gene for coat protein, segment RNA3, isolate AH-GZ, genomic RNA

ACC No: FM955366

Dated: 2008-12-24 | Length: 1051 | CRC: 1602235459

                
ID   FM955366; SV 1; linear; genomic RNA; STD; VRL; 1051 BP.
XX
AC   FM955366;
XX
DT   24-DEC-2008 (Rel. 98, Created)
DT   24-DEC-2008 (Rel. 98, Last updated, Version 1)
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DE   Rice stripe virus CP gene for coat protein, segment RNA3, isolate AH-GZ,
DE   genomic RNA
XX
KW   .
XX
OS   Rice stripe virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
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RN   [1]
RP   1-1051
RA   Jiang T.;
RT   ;
RL   Submitted (22-DEC-2008) to the EMBL/GenBank/DDBJ databases.
RL   Jiang T., College of Plant Protection, Anhui Agriculture University,
RL   Changjiang West Road 130, Hefei, Anhui, 230036, CHINA.
XX
RN   [2]
RA   Ding F., Jiang T.;
RT   "Cloning and sequence analysis of CP of Rice stripe virus (RSV) derived
RT   from Anhui Province";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1051
FT                   /organism="Rice stripe virus"
FT                   /segment="RNA3"
FT                   /host="Oryza sativa"
FT                   /isolate="AH-GZ"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Anhui"
FT                   /db_xref="taxon:12331"
FT   CDS             complement(51. .1019)
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="CAW30724.1"
FT                   /translation="MGTNKPATLADLQKAINDISKDALSYLTAHKADVVTFAGQIEYAG
FT                   YDAATLIGILKDKGGDTLAKDMTMCITMRYVRGTGFVRDVTKKVKVAAGSTEASTLVSR
FT                   YGIVSSVGTNANAITLGRLAQLFPNVSHEVVRQISGVKMAVDSSDLGLTGCDNLLWDYV
FT                   PQYIKLESETAPYCTTHSLSHILFVVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT
FT                   TGLLVITCKSKNLADKKKEDGRKKVLDEFITNGKVKTTIFDALAGMSVNTISTYGNQTR
FT                   LYLAQQSKLMKILAENTSKTASEVSGLVKEFFEDEAEGADD"
XX
SQ   Sequence 1051 BP; 249 A; 268 C; 222 G; 312 T; 0 other;

fm955366 Length: 1051  24-DEC-2008  Type: N  Check: 8655  ..

       1  gcgtcttcca gggagatatg agatccccca caactactga cttgttcagt
      51  ctagtcatct gcgccttctg cctcgtcctc gaaaaactcc ttcaccaacc
     101  cgctgacttc agatgctgtc tttgaagtgt tctcagcaag gatcttcatc
     151  agtttgctct gttgagccaa gtacagcctt gtctgattcc cataagtgct
     201  gatcgtattg acagacatac cagccagtgc atcgaagatt gtggtcttca
     251  ctttcccatt ggtgatgaat tcatctaaga ccttctttct gccatcttcc
     301  ttcttcttgt cagccaggtt ctttgacttg catgtgatga ccaggagacc
     351  agttgtgtac ttcatcatgt ctatgtcttt tgtcagacca cgctccttct
     401  tcttaccctc tggcatggtc tttttggtta tttggaagga gtgaatgatg
     451  tgcacaacaa acaaaatgtg acttagggag tgagttgtgc agtaaggagc
     501  tgtttcactc tccagtttga tatattgtgg aacatagtcc cacagcaagt
     551  tatcacatcc tgttagtccc aggtcagagg agtccacagc catcttaaca
     601  ccagaaattt gtctcacaac ttcatgtgag acatttggga atagctgagc
     651  cagccttcca agtgtgatag cattggcatt tgtccccacc gaggacacta
     701  tcccatacct cgacaccaag gtagaagcct ctgtgcttcc agccgccact
     751  ttcactttct tagtgacatc tctcacaaag ccagtgcctc tcacatatct
     801  catggtgatg cacatagtca tatccttggc cagtgtgtca ccacctttgt
     851  ccttcaatat gccaatcaga gttgcagcat catagcctgc atactctatc
     901  tgaccagcaa aggtcacaac atcagcttta tgagcagtca ggtaagacaa
     951  cgcatctttg gagatgtcat tgattgcctt ctgcaaatca gctagagtgg
    1001  ctggcttgtt ggtgcccatt gtagcaagag gtactggagg aatggttgcg
    1051  g