Sequence of DPV Tomato leaf curl Hsinchu virus
Ramie mosaic virus complete DNA-B genome, isolate J4
ACC No: FN396970
Dated: 2009-06-05 | Length: 2717 | CRC: -116393832
ID FN396970; SV 1; circular; genomic DNA; STD; VRL; 2717 BP.
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AC FN396970;
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DT 05-JUN-2009 (Rel. 101, Created)
DT 05-JUN-2009 (Rel. 101, Last updated, Version 1)
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DE Ramie mosaic virus complete DNA-B genome, isolate J4
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KW complete genome.
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OS Ramie mosaic virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
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RN [1]
RP 1-2717
RA Zhou X.P.;
RT ;
RL Submitted (31-MAY-2009) to the EMBL/GenBank/DDBJ databases.
RL Zhou X.P., Zhejiang University, Institute of Biotechnology, NO. 268,
RL Kaixuan Road, Hangzhou, Zhejiang, 310029, CHINA.
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RN [2]
RA Li J., Qian Y.;
RT "Molecular Characterization of Ramie mosaic virus in China";
RL Unpublished.
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FH Key Location/Qualifiers
FH
FT source 1. .2717
FT /organism="Ramie mosaic virus"
FT /mol_type="genomic DNA"
FT /country="China:Jiangsu province"
FT /lat_lon="31.21 N 119.49 E"
FT /isolation_source="ramie"
FT /collected_by="Xue-ping Zhou"
FT /collection_date="11-May-2008"
FT /db_xref="taxon:486809"
FT CDS 323. .1153
FT /gene="BV1"
FT /product="BV1 protein"
FT /protein_id="CAZ40078.1"
FT /translation="MRIPIRSPGGFNVDRRVTGGAVFRPNYPYRRYFGRRIGQRVYGMP
FT YSGGSQRPRGVPNARRNLFSVQPETRRKTRQTIEEVQDGTNYLLCNNTSKVSYLTYPAK
FT SRSEFSSRVDSYIKLLSLNVSGSVIARHLDRSEGASGNGIHGIFTTVIVRDKRPCQFSA
FT VDPLIPFADVFGLEKGACSTLRVRDQHRDRFSLVYQKKCVINTALPEHVFRFAYNVRFN
FT SYPVYVQFKDTEDSEPTGLYGNVSKNALIVYYVWLCDANVTSEIHVKYDLHYIG"
FT CDS complement(1167. .2003)
FT /gene="BC1"
FT /product="BC1 protein"
FT /protein_id="CAZ40079.1"
FT /translation="MADNSSALAYATSDRTEFQLSSEKTEVTLLFPSTIEQKLSKLMGK
FT CLRIDHVVLEYRNQVPVNATGHVIIEMHDTRLYEGDSKQAEFTIPIGCNCNIHYYSSSY
FT FSPRDPNPWKVMYRVDDTNVVDGVHFCRMQGKLKMSSAKQSSEIQFKSPKIEILSKAYN
FT MTNIDFWSVPHSQVSRRPVQGLSNLRSQSSRYTTPAILPGQSWASASAVGNEEQEDLPY
FT GNLHRLQDKTLDPGPSASEVICNTNIVNDDVINIIKKTVELCMEGSNVTSNVKPIK"
XX
SQ Sequence 2717 BP; 716 A; 567 C; 587 G; 847 T; 0 other;
fn396970 Length: 2717 05-JUN-2009 Type: N Check: 848 ..
1 accggatggc cgcgattttt ttgaaagtgg tcccaccacg cacagatgtc
51 accgcttagg aggcttcctc ccagctgtcc cccactaatg ttggatggca
101 gcgctttaat ttgaatgggt ttccctctat gcgctgctgc ccccactgat
151 gacgctcctt cccactcagt gcgctctcag taaatatccc tgacattaat
201 gcatacttgc attcatccta accgttatta atggacacgc gtcagccgtt
251 aaggaactca ctctaatttg aaattaatat atatagggat attctcttgg
301 tgtttccgca ttgtgaagta aaatgagaat tcccattaga tctcctggtg
351 ggtttaatgt agaccggaga gtcactggtg gagctgtctt ccgcccgaat
401 tatccatatc gccgatactt cggccgacga attggtcaac gtgtatatgg
451 catgccttat tctggtgggt cccaacgtcc acgtggggtg cctaatgcac
501 gtcggaactt gttttccgtt caaccggaaa caaggaggaa gacccgtcaa
551 actatagagg aggttcagga tggtacaaat taccttctct gtaacaacac
601 ctctaaggtg tcttatctca cgtacccggc gaagtctagg tctgaattca
651 gcagccgggt agactcatac atcaaactgt taagtttgaa tgtgtctggg
701 tctgtaattg cccggcattt ggacaggtcg gaaggtgcct ctgggaatgg
751 aatacatggc atattcacga cggttatcgt tcgtgataaa agaccatgtc
801 agttctctgc tgttgatcca ttgatccctt ttgctgatgt gtttggactg
851 gagaagggcg cgtgttccac tttgcgcgtg cgtgatcagc atagggatag
901 atttagttta gtttaccaga agaagtgcgt gattaatacc gcacttccag
951 aacatgtatt tagatttgca tataatgtta ggtttaattc gtacccagtc
1001 tatgtacaat ttaaggacac ggaggattcc gaacctactg gcctctatgg
1051 caacgtgtcc aagaatgcac ttatagttta ttatgtttgg ttgtgtgatg
1101 ccaatgtaac ctctgagatt catgtaaaat atgatctgca ctatattgga
1151 taaataaaat cgcattttat tttattggtt ttacattaga tgttacatta
1201 ctgccctcca tacacaactc aacagttttt ttgatgatgt ttatgacatc
1251 atcatttaca atattggtgt tgcaaataac ttcagaagca gatgggcctg
1301 ggtccagtgt cttgtcttgt aatctgtgta ggtttccata tggtaggtcc
1351 tcctgttctt cgttcccaac tgcactagcg gaagcccatg actgtccagg
1401 tagtatagcg ggagttgtgt atctgcttga ctgggaccgt aaattagaca
1451 gaccctgtac aggtctcctc gaaacctgcg agtggggcac tgaccagaaa
1501 tcaatgttgg tcatgttata tgccttggac agtatctcta tctttgggga
1551 tttgaactgt atttcggagg actgcttagc tgatgacatt ttcagcttcc
1601 cttgcatcct gcagaaatgt acaccatcca cgacattcgt gtcgtctacc
1651 ctgtacataa ccttccaagg atttgggtct ctcggtgaaa aatatgacga
1701 ggagtaatag tggatgttgc agttacatcc aattggaatt gtaaactccg
1751 cctgcttgga atcaccttcg tataacctgg tatcgtgcat ttctatgatg
1801 acgtgtccag tggcattaac gggaacctga ttcctatact caagaacgac
1851 atggtcgatc ctcaagcact tgcccataag ttttgacaat ttttgttcaa
1901 ttgtgcttgg gaataacaag gttacctcgg tcttctcact ggatagttga
1951 aattctgtcc tgtcagacgt ggcatatgcc agcgcacttg aattatcagc
2001 catcttgtga ttgatgcgtt gcttgttgga ttgggtcgac atttataatg
2051 ggctgcagcc ttgcagtgca cgaactggcc ctaccagttt taccaaataa
2101 gttttgaggc ttggttgata ttgggccacg tcatacatgc acagtccatt
2151 tttatcatcg tcctttgatc aagtcccaga ggagattgaa tgctgggttg
2201 cagatagatt aatcaggtta acatacctgt taacaccaaa caatcaaata
2251 aattacaaac tactgaccaa ttatccaatt ccttaacggc aacaaataaa
2301 cctaattagt aattaaatat tgtgatggtt tccctcatat ttaataaatc
2351 atttatgaac ttcaattaat tttatagttg gccgcgcagc ggcagcgtct
2401 tcgttgatag gactataaac aaatatataa atcaacaact ttaatctgat
2451 aaacgtatca gaagtaggtg agattgcaat atatcagaaa gaaaataaat
2501 tatatttatt aatctgtgtt tattttgcac tacgaggcgt tttcgcctag
2551 ttggaagtgt ttcctctcga gagagatcta ttgacttggt caatcgggga
2601 tcaaccatct atcccattca atcggggaat ggggatcaat atatacttga
2651 gaccctaatg gcataattgt aatttgtaaa atatttgaaa tttcatcgcg
2701 gccatccgtt taatatt