Sequence of DPV Alternanthera yellow vein virus

Alternanthera yellow vein virus AV2 gene (partial) and AV2 gene (partial) for coat protein, isolate YYJi2 from Crassocephalum crepidioides

ACC No: FN397863

Dated: 2010-06-06 | Length: 814 | CRC: 391735416

                
ID   FN397863; SV 1; linear; genomic DNA; STD; VRL; 814 BP.
XX
AC   FN397863;
XX
DT   06-JUN-2010 (Rel. 105, Created)
DT   06-JUN-2010 (Rel. 105, Last updated, Version 1)
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DE   Alternanthera yellow vein virus AV2 gene (partial) and AV2 gene (partial)
DE   for coat protein, isolate YYJi2 from Crassocephalum crepidioides
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KW   .
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OS   Alternanthera yellow vein virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC   unclassified Begomovirus.
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RN   [1]
RP   1-814
RA   Li F.;
RT   ;
RL   Submitted (05-JUN-2009) to the EMBL/GenBank/DDBJ databases.
RL   Li F., Plant pathology, Plant protection, Yunnan Agriculture University,
RL   CHINA.
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RN   [2]
RA   Li F., Zhou X.P., Guo J.;
RT   "Molecular characterization of begomovirus infecting Eclipta prostrata L in
RT   Yunnan";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .814
FT                   /organism="Alternanthera yellow vein virus"
FT                   /host="Crassocephalum crepidioides"
FT                   /isolate="YYJi2"
FT                   /mol_type="genomic DNA"
FT                   /country="China:Yunnan, Yuanjiang"
FT                   /db_xref="taxon:337826"
FT   CDS             154. .501
FT                   /codon_start=1
FT                   /gene="AV2"
FT                   /product="AV2 protein"
FT                   /protein_id="CAZ64214.1"
FT                   /translation="MWDPLLNPFPKTVHGFRCMLAVKYLQAVEETYAPDTLGFDLIRDL
FT                   ILVIRASNYVEACSRYDHFIQRIEGTSTSELRQSYSTPCYCPHCARHSKAAVVEPSHVP
FT                   QTKAVQNVQKP"
FT   CDS             314. .>814
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /protein_id="CAZ64215.1"
FT                   /translation="MSKRAADMIISSSGSRVRRRLNFDSPIARRVTVPTVRATRKQQWS
FT                   NRPMYRKPRLYRMYRSPDVPYGCEGPCKVQSFEKKHDVSHTGTLLCVSDVTRGNGITHR
FT                   VGKRFCIKSIYILGKIWMDENIKSKNHTNTVMFWLVRDRRPVTTPYGFGEAFNMYDNDP
FT                   STAT"
XX
SQ   Sequence 814 BP; 212 A; 177 C; 197 G; 228 T; 0 other;

fn397863 Length: 814  06-JUN-2010  Type: N  Check: 4812  ..

       1  accgatggcc aaaaaaaaat ttatgccggc cccaccctgc agcttttgtc
      51  tgccactagc agatcccggc caatcagaat tgagcctgaa aggttaaata
     101  aaattggcgc ccgctttaaa tgcttggcca ctacgtttag tgcgcaaacc
     151  actatgtggg atccgctttt gaatccgttt cccaagacag tgcacggctt
     201  tcgttgcatg cttgctgtaa agtatttaca ggccgttgaa gagacatacg
     251  ctcctgatac tttaggtttt gatttaatta gagatttaat tttggtaatt
     301  agggcttcta attatgtcga agcgtgcagc cgatatgatc atttcatcca
     351  gcggatcgag ggtacgtcga cgtctgaact tcgacagtcc tatagcacgc
     401  cgtgttactg tccccactgt gcgcgccact cgaaagcagc agtggtcgaa
     451  ccgtcccatg taccgcaaac caaggctgta cagaatgtac agaagccctg
     501  atgtgccgta tggctgtgag ggtccttgta aagtccagtc atttgaaaag
     551  aaacatgatg ttagtcatac aggcacgttg ttgtgcgttt ctgatgttac
     601  cagaggcaat gggattactc atagagtagg gaagcgtttt tgtattaagt
     651  caatttatat cctggggaag atatggatgg atgagaacat taagtccaag
     701  aatcatacta acacggttat gttctggtta gttagggatc gtcgcccagt
     751  cacaacgcct tatggttttg gtgaggcgtt taacatgtat gacaatgacc
     801  cgtctactgc gact