Sequence of DPV Rice yellow mottle virus

Rice yellow mottle virus ORF4, genomic RNA, isolate Ch32

ACC No: FN432851

Dated: 2010-07-27 | Length: 720 | CRC: -450043174

                
ID   FN432851; SV 1; linear; genomic RNA; STD; VRL; 720 BP.
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AC   FN432851;
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DT   27-JUL-2010 (Rel. 105, Created)
DT   27-JUL-2010 (Rel. 105, Last updated, Version 1)
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DE   Rice yellow mottle virus ORF4, genomic RNA, isolate Ch32
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KW   .
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OS   Rice yellow mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Sobemovirus.
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RN   [1]
RP   1-720
RA   Fargette D.;
RT   ;
RL   Submitted (27-JUL-2009) to the EMBL/GenBank/DDBJ databases.
RL   Fargette D., Ird, Dgpc, BP64501, 34394 Montpellier cedex 5, FRANCE.
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RN   [2]
RA   Pinel-Galzi A., Mpunami A., Sangu E., Rakotomalala M.;
RT   "Recombination, selection and clock-like evolution of Rice yellow mottle
RT   virus";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .720
FT                   /organism="Rice yellow mottle virus"
FT                   /isolate="Ch32"
FT                   /mol_type="genomic RNA"
FT                   /country="Chad"
FT                   /db_xref="taxon:31744"
FT   CDS             1. .720
FT                   /gene="ORF4"
FT                   /product="coat protein"
FT                   /protein_id="CBA11891.1"
FT                   /translation="MARKGKKINSNQGQQGKKKGRRPRGRSAEPQLQRAPVAQASRISG
FT                   MVPGPLSSNTWPLHSVEFLADFKRSSTSADATTYNCVPFNLPRVWSLARCYSMWKPTRW
FT                   DVVYLPEVSATVAGSIEMCFLYDYADTIPSDTGKMSRTAGFVTSSVWYGAEGCHLLSGG
FT                   SARNAVVASMDCSRVGWKRVTSSIPSSVDPNVVNTILPARLAVRSSIKPTVDDAPGKLY
FT                   AIVSMVLRDPVDPTLNT"
XX
SQ   Sequence 720 BP; 153 A; 199 C; 217 G; 151 T; 0 other;

fn432851 Length: 720  27-JUL-2010  Type: N  Check: 5742  ..

       1  atggccagga agggcaagaa aatcaactcc aaccaggggc agcaaggaaa
      51  gaagaagggc cgacgcccac gtgggcgctc ggcggagccc cagcttcaac
     101  gggctccagt ggctcaggcc tcccggatat ctgggatggt tcctggtcca
     151  ctatcttcta acacctggcc gctccactcc gttgagttcc ttgcggactt
     201  caagcggagt tccacatcgg cggacgcgac gacatacaat tgtgtgccgt
     251  ttaatctgcc tcgggtgtgg agtcttgcgc gttgttactc catgtggaag
     301  ccaacacggt gggatgtcgt ctacctccca gaggttagtg cgacagttgc
     351  ggggagtatc gagatgtgtt ttctctacga ctacgctgac acaatcccaa
     401  gtgacacggg caagatgagc aggacggcgg gcttcgtcac ctccagcgtt
     451  tggtacggcg cggagggctg ccacttgttg agtggcggct cagcacggaa
     501  tgccgtggtc gcctcgatgg actgttcccg agtcggctgg aaacgcgtta
     551  ctagttccat acctagtagc gtggatccca acgtcgtaaa taccatactg
     601  ccagcaaggc tagctgtgcg atcgtcgatc aaaccgacgg ttgacgacgc
     651  gccggggaaa ctctacgcga tcgttagtat ggtcctgcgg gatccggttg
     701  atccaacact caatacgtga