Sequence of DPV Rice yellow mottle virus

Rice yellow mottle virus ORF4, genomic RNA, isolate Tz229

ACC No: FN432877

Dated: 2010-07-27 | Length: 720 | CRC: 477068810

                
ID   FN432877; SV 1; linear; genomic RNA; STD; VRL; 720 BP.
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AC   FN432877;
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DT   27-JUL-2010 (Rel. 105, Created)
DT   27-JUL-2010 (Rel. 105, Last updated, Version 1)
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DE   Rice yellow mottle virus ORF4, genomic RNA, isolate Tz229
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KW   .
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OS   Rice yellow mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Sobemovirus.
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RN   [1]
RP   1-720
RA   Fargette D.;
RT   ;
RL   Submitted (27-JUL-2009) to the EMBL/GenBank/DDBJ databases.
RL   Fargette D., Ird, Dgpc, BP64501, 34394 Montpellier cedex 5, FRANCE.
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RN   [2]
RA   Pinel-Galzi A., Mpunami A., Sangu E., Rakotomalala M.;
RT   "Recombination, selection and clock-like evolution of Rice yellow mottle
RT   virus";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .720
FT                   /organism="Rice yellow mottle virus"
FT                   /isolate="Tz229"
FT                   /mol_type="genomic RNA"
FT                   /country="Tanzania"
FT                   /db_xref="taxon:31744"
FT   CDS             1. .720
FT                   /gene="ORF4"
FT                   /product="coat protein"
FT                   /protein_id="CBA11917.1"
FT                   /translation="MARKGKKTNSNQGQQGKKKSRRPRGRSAEPQLQRAPVAQASRISG
FT                   TVPGPLSSNTWPVHSVEFLMDFKRSATSADATTFNCVPFNLPRVWNLARCYSMWKPTRW
FT                   DVVYLPEVSAATAGSIEMCYLYDYADAVPSDTGKMSRTAGFVTSSVWYGXEGCHLLSGG
FT                   AARNAVVASMDCSRVGWKRVTSSIPDSVDPNVVNTILPARLAVRSSIKPTVDDVPGKLY
FT                   VIVGMVLRDPVDPTLNT"
XX
SQ   Sequence 720 BP; 157 A; 185 C; 214 G; 163 T; 1 other;

fn432877 Length: 720  27-JUL-2010  Type: N  Check: 381  ..

       1  atggccagga agggcaagaa aaccaactcc aaccagggcc agcaaggaaa
      51  gaagaagagt cgacgccctc gtggtcgttc ggcggagccc cagcttcaac
     101  gggctccagt ggctcaggcc tcccggatat ctgggacggt tcctggacca
     151  ctatcttcta acacctggcc ggtccactcc gtggaattcc tgatggattt
     201  taagcggagt gccacatcgg cggatgcgac gacattcaat tgtgtgccgt
     251  ttaacctgcc tcgggtgtgg aatcttgcgc gttgttattc aatgtggaag
     301  ccaacacggt gggacgtcgt ttacctccct gaggtgagcg ctgcaacggc
     351  tggaagtatt gagatgtgtt atctctacga ctatgctgat gccgtcccaa
     401  gtgacacggg caagatgagc aggacggcgg gcttcgtgac ctctagcgtt
     451  tggtacggcg stgagggctg ccacttatta agtggcggtg cagcacgaaa
     501  tgccgtggtc gcctcgatgg attgttctcg agtcggctgg aaacgcgtta
     551  ccagttcaat acctgatagc gtggatccca acgtcgtaaa taccatactg
     601  ccggctaggc tagccgtgcg atcgtcgatc aaaccgacgg ttgatgatgt
     651  accggggaaa ctctatgtca ttgtcggtat ggtcctgcgg gatccggttg
     701  atccaacact caatacgtga