Sequence of DPV Rice yellow mottle virus

Rice yellow mottle virus ORF4, genomic RNA, isolate Tz1103

ACC No: FN432900

Dated: 2010-07-27 | Length: 720 | CRC: -1368092489

                
ID   FN432900; SV 1; linear; genomic RNA; STD; VRL; 720 BP.
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AC   FN432900;
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DT   27-JUL-2010 (Rel. 105, Created)
DT   27-JUL-2010 (Rel. 105, Last updated, Version 1)
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DE   Rice yellow mottle virus ORF4, genomic RNA, isolate Tz1103
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KW   .
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OS   Rice yellow mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Sobemovirus.
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RN   [1]
RP   1-720
RA   Fargette D.;
RT   ;
RL   Submitted (27-JUL-2009) to the EMBL/GenBank/DDBJ databases.
RL   Fargette D., Ird, Dgpc, BP64501, 34394 Montpellier cedex 5, FRANCE.
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RN   [2]
RA   Pinel-Galzi A., Mpunami A., Sangu E., Rakotomalala M.;
RT   "Recombination, selection and clock-like evolution of Rice yellow mottle
RT   virus";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .720
FT                   /organism="Rice yellow mottle virus"
FT                   /isolate="Tz1103"
FT                   /mol_type="genomic RNA"
FT                   /country="Tanzania"
FT                   /db_xref="taxon:31744"
FT   CDS             1. .720
FT                   /gene="ORF4"
FT                   /product="coat protein"
FT                   /protein_id="CBA11940.1"
FT                   /translation="MAREGKKINSNQGQQGKKKSRRPRGRSAEPQLQRAPVAQASRISG
FT                   TVPGPLSSNTWPVHSVEFLMDFKRSATSADATTFNCVPFNLPRVWNLARCYSMWKPTRW
FT                   DVVYLPEVSAATAGSIEMCYLYDYADAVPSDTGKMSRTAGFVTSSVWYGAEGCHLLSGG
FT                   AARNAVVASMDCSRVGWKRVTSSIPDSVDPNVVNTILPARLAVRSSIKPTVDDTPGKLY
FT                   VIVGMVLRDPVDPTLNT"
XX
SQ   Sequence 720 BP; 157 A; 190 C; 213 G; 160 T; 0 other;

fn432900 Length: 720  27-JUL-2010  Type: N  Check: 9263  ..

       1  atggccaggg aaggcaagaa aatcaactcc aaccagggcc agcaaggaaa
      51  gaagaagagc cgacgccctc gtggccgttc ggcggagccc cagcttcaac
     101  gggctccagt ggctcaggcc tcccggatat ctgggacggt tcctggacca
     151  ctatcttcta acacctggcc ggtccactcc gtggaattcc taatggattt
     201  taagcggagt gccacatcgg cggatgcgac gacattcaac tgtgtgccgt
     251  ttaatctgcc tcgggtgtgg aatcttgcgc gttgttactc aatgtggaag
     301  ccaacacggt gggacgtcgt ttacctccct gaggtgagcg ctgctacggc
     351  tggaagtatt gagatgtgct atctctacga ctatgctgat gccgtcccaa
     401  gtgacacggg caagatgagc aggacggcgg gcttcgtgac ctctagcgtt
     451  tggtacggcg ctgagggctg ccacttattg agtggcggtg cagcacgaaa
     501  tgccgtggtc gcctcgatgg attgttctcg agtcggctgg aaacgcgtta
     551  ccagttcaat acctgatagc gtggatccca acgtcgtaaa caccatactg
     601  ccggctaggc tagccgtgcg atcgtcgatt aaaccgacgg ttgatgatac
     651  accggggaaa ctctatgtta tcgtcggtat ggtcctgcgg gatccggttg
     701  atccaacact caatacgtga