Sequence of DPV Rice yellow mottle virus

Rice yellow mottle virus ORF4, genomic RNA, isolate Tz1110

ACC No: FN432902

Dated: 2010-07-27 | Length: 720 | CRC: 1688673375

                
ID   FN432902; SV 1; linear; genomic RNA; STD; VRL; 720 BP.
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AC   FN432902;
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DT   27-JUL-2010 (Rel. 105, Created)
DT   27-JUL-2010 (Rel. 105, Last updated, Version 1)
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DE   Rice yellow mottle virus ORF4, genomic RNA, isolate Tz1110
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KW   .
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OS   Rice yellow mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Sobemovirus.
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RN   [1]
RP   1-720
RA   Fargette D.;
RT   ;
RL   Submitted (27-JUL-2009) to the EMBL/GenBank/DDBJ databases.
RL   Fargette D., Ird, Dgpc, BP64501, 34394 Montpellier cedex 5, FRANCE.
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RN   [2]
RA   Pinel-Galzi A., Mpunami A., Sangu E., Rakotomalala M.;
RT   "Recombination, selection and clock-like evolution of Rice yellow mottle
RT   virus";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .720
FT                   /organism="Rice yellow mottle virus"
FT                   /isolate="Tz1110"
FT                   /mol_type="genomic RNA"
FT                   /country="Tanzania"
FT                   /db_xref="taxon:31744"
FT   CDS             1. .720
FT                   /gene="ORF4"
FT                   /product="coat protein"
FT                   /protein_id="CBA11942.1"
FT                   /translation="MARKGKKTNSNQNQQGKKSRRPRGRSAEPRLQRAPVAQASRISGM
FT                   VPGPLSSNVWPVGRSVEFLMDFKRSATSGDATIFNCVPFNLPRVWSLARCYSLWKPTRW
FT                   DVVYLPEVSAATAGSIEMCYLYDYADTIPSDTGKMSRTAGFVTSSVWYGAEGCHLLTGG
FT                   SARNAVVASMDCSRVDWRRVTSSIPSDVDPNVVNTILPARLAVRSSIKPAVDDAPGKLY
FT                   AIVSMVLRDPVDPTLNT"
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SQ   Sequence 720 BP; 152 A; 190 C; 212 G; 166 T; 0 other;

fn432902 Length: 720  27-JUL-2010  Type: N  Check: 2315  ..

       1  atggccagga agggcaagaa aaccaactcc aatcaaaacc agcaaggcaa
      51  gaagagccgg cgcccccgtg ggcgttcggc ggaaccccgg cttcaacggg
     101  ctccagtggc tcaggcctcc cggatatctg ggatggttcc tggtccacta
     151  tcttctaatg tctggccggt tggccgctcc gtggaattcc tgatggattt
     201  taaacggagc gccacctcgg gagatgcgac catatttaat tgtgtgccgt
     251  ttaatctacc ccgagtgtgg agtcttgcgc gttgttactc cttgtggaag
     301  ccaacaaggt gggatgtcgt ctacctccct gaggttagtg cggcgacggc
     351  tggaagtatc gagatgtgtt atctctacga ctatgccgac accatcccaa
     401  gtgacacggg caagatgagc aggacggcgg gcttcgtcac ctctagcgtt
     451  tggtacggcg cggagggctg ccatttgtta actggtggct cagcacggaa
     501  tgccgtggtc gcctcgatgg attgttctcg agtcgactgg agacgcgtta
     551  ctagttcaat tcctagtgac gtggatccca acgtcgtaaa caccatactg
     601  ccagctaggc tagctgtgcg gtcgtcgatt aaaccggcgg ttgatgatgc
     651  accaggcaag ctgtatgcta tcgtcagtat ggtcctgcgg gatccggttg
     701  acccaacact caatacgtga