Sequence of DPV Rice grassy stunt virus

Rice grassy stunt virus NCP gene for nucleocapsid protein, isolate Long An, genomic RNA

ACC No: FN433644

Dated: 2009-08-04 | Length: 978 | CRC: 410296334

                
ID   FN433644; SV 1; linear; genomic RNA; STD; VRL; 978 BP.
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AC   FN433644;
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DT   04-AUG-2009 (Rel. 101, Created)
DT   04-AUG-2009 (Rel. 101, Last updated, Version 1)
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DE   Rice grassy stunt virus NCP gene for nucleocapsid protein, isolate Long An,
DE   genomic RNA
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KW   .
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OS   Rice grassy stunt virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
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RN   [1]
RP   1-978
RA   Hoang H.;
RT   ;
RL   Submitted (01-AUG-2009) to the EMBL/GenBank/DDBJ databases.
RL   Institution of Biotechnology, Plant Cell Biotechnology, 18 Hoang Quoc Viet,
RL   Cau Giay, Hanoi, 10000, VIET NAM.
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RN   [2]
RA   Hoang N.T., Hoang H.T.T., Hoang H.T., Nguyen S.N., Dang T.L.A.,
RA   Nguyen C.N., Nguyen C.H., Chu H.H., Nguyen N.T., Le B.T.;
RT   "Genetic variation of Rice grassy stunt virus strains isolated from
RT   different regions in Vietnam";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .978
FT                   /organism="Rice grassy stunt virus"
FT                   /segment="5"
FT                   /host="Oryza sativa"
FT                   /isolate="Long An"
FT                   /mol_type="genomic RNA"
FT                   /country="Viet Nam:Long An Province"
FT                   /isolation_source="host leaf tissue lysate"
FT                   /collection_date="2009"
FT                   /db_xref="taxon:66266"
FT   CDS             1. .978
FT                   /gene="NCP"
FT                   /product="nucleocapsid protein"
FT                   /protein_id="CBA12676.1"
FT                   /translation="MGKVQFGDGHWANNKEWSELLSEIFSKIRASIDGFANATADLAAG
FT                   LEYQAFNPEKILRKLIAPSTSLDDSVKDMRDLLVARYTRGTSFLFNAKNSIEKAKDKKK
FT                   AEAIQVLINRYGVKKNAGDNAVDQATLGRISQVLAYMALRVALQITDYHKPIIPLRPIS
FT                   TVDIKNAIIDVVPQFLYLKADQLDSKTNSEAALYVIHLCYQVCVSEGIMTKAQKDKHGV
FT                   HTKSAMITHCMGFVNLAMDNSSVVSDDKIAGRRMISGPWGLQETALDATGCACIIDVVD
FT                   FCCRGHKVTDAVAPVRLFRLAIECIKDTADLKDAGVKLKTLVDK"
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SQ   Sequence 978 BP; 303 A; 163 C; 237 G; 275 T; 0 other;

fn433644 Length: 978  04-AUG-2009  Type: N  Check: 7183  ..

       1  atgggtaaag tgcagtttgg agatggtcac tgggcaaata acaaggaatg
      51  gtctgagttg ttatcagaaa tattttcaaa aatcagagca tctatagatg
     101  gatttgccaa tgctacagct gatttggctg caggattgga gtatcaggct
     151  ttcaatcctg aaaagatttt gaggaagttg attgcaccct caacttcatt
     201  ggatgactct gttaaggata tgcgtgacct cttggtggcc aggtacacca
     251  gaggaactag cttcttgttc aatgctaaaa actcaattga gaaagcaaag
     301  gataagaaga aggctgaagc tattcaggta ctgataaata ggtacggagt
     351  aaaaaagaat gctggtgaca atgctgttga tcaagccact ttgggaagga
     401  taagtcaagt gttggcatat atggccttga gagttgcttt acaaatcaca
     451  gactatcata agccaatcat accattgaga cccattagta ccgttgatat
     501  aaagaatgct attattgatg ttgttccaca atttttatat cttaaagcag
     551  atcaacttga ttcaaagacc aactcagaag cagctctgta tgtaatccat
     601  ttgtgttacc aagtctgtgt gtctgaagga atcatgacta aagctcagaa
     651  agataagcac ggtgttcaca ctaagtcagc aatgataaca cactgcatgg
     701  gttttgtcaa tctggctatg gataattctt cagtagtgtc tgatgataag
     751  atagctggta gaaggatgat ctcaggtcca tggggactac aggaaactgc
     801  tctagatgcc acaggctgcg catgtatcat tgatgttgtt gatttctgct
     851  gcagggggca caaagtaaca gatgctgtgg cgccagttcg gctgttcaga
     901  ttagctattg agtgcataaa agacacagct gatctgaagg atgctggagt
     951  caaattgaag actttggttg ataagtga