Sequence of DPV African cassava mosaic virus
African cassava mosaic virus segment DNA-A, complete sequence, isolate ACMCV-Ybi3[Cm]
ACC No: FN435277
Dated: 2010-11-10 | Length: 2781 | CRC: 61780995
ID FN435277; SV 1; linear; genomic DNA; STD; VRL; 2781 BP.
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AC FN435277;
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DT 07-JAN-2010 (Rel. 103, Created)
DT 10-NOV-2010 (Rel. 106, Last updated, Version 2)
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DE African cassava mosaic virus segment DNA-A, complete sequence, isolate
DE ACMCV-Ybi3[Cm]
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KW .
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OS African cassava mosaic virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2781
RA MONDE G.;
RT ;
RL Submitted (30-JUL-2009) to the EMBL/GenBank/DDBJ databases.
RL MONDE G., Unite de phytopathologie, Universite catholique de Louvain, 1348,
RL Louvain-la-Neuve, BELGIUM.
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RN [2]
RA Monde G., Walangululu J., Winter S., Bragard C.;
RT "Dual infection by cassava begomoviruses in two leguminous species
RT (Fabaceae) in Yangambi, Northeastern Democratic Republic of Congo";
RL Arch. Virol. 155(11):1865-1869(2010).
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FH Key Location/Qualifiers
FH
FT source 1. .2781
FT /organism="African cassava mosaic virus"
FT /segment="DNA-A"
FT /host="Centrosema pubescens"
FT /isolate="ACMV-Ybi3[Cm]"
FT /mol_type="genomic DNA"
FT /country="Democratic Republic of the Congo:Yangambi"
FT /isolation_source="host leaves"
FT /collected_by="MONDE Godefroid"
FT /collection_date="12-Nov-2008"
FT /identified_by="Monde Godefroid"
FT /db_xref="taxon:10817"
FT CDS complement(1214. .1621)
FT /gene="AC2"
FT /product="activator of transcription protein"
FT /db_xref="GOA:D2TG95"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProtKB/TrEMBL:D2TG95"
FT /protein_id="CBA13509.1"
FT /translation="MQSSSPSQNHSTQVPIKVSHRQFKKRAIRCRRVDRVCGCSYYLHI
FT NCSNHGFTHRGTHHCSSSNEWRVYLGNKQSPVFHNHQAPTTTIPAEPGHHNSPGSIQSQ
FT PEEGAGDSQMFSQLQDLDDLTASDWSFLKGL"
FT CDS complement(2150. .2572)
FT /gene="AC4"
FT /product="symptom expression protein"
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProtKB/TrEMBL:D2TG96"
FT /protein_id="CBA13510.1"
FT /translation="MSFSHTQSVLYPKNTCCHSFKHYLSHQTLSSLKSVESCIRMGNLT
FT CMPSSNSRGKSRLRTIVSSIVYTQPVAPISTPTFKVPNQAQMSSPIWIRTETPSNGDNF
FT RSMDDLLEAVNNQRMMLTPEALTAAVSQKLLMSLGN"
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SQ Sequence 2781 BP; 749 A; 559 C; 678 G; 795 T; 0 other;
fn435277 Length: 2781 10-NOV-2010 Type: N Check: 3696 ..
1 accggttggc cccgcccccc tttaaacgtg gtccccgcgc actacgtatg
51 tcggccaatc atgttgtagc tttaaaggtt atgtattagt ggtggaccac
101 tatatactta caggcgaagt tgttgctagt gcgcaatgtg ggatccactg
151 gtgaatgagt ttccagactc ggtgcatggg cttaggtgta tgcttgcaat
201 taaatatttg caggccttag aggatacata cgagcccagt actttgggcc
251 acgatctggt tagagatcta gtctcagtta tcagggctcg taattatgtc
301 gaagcgacca ggagatatca tcatttccac tccaggctcc aaggttcgtc
351 gaaggctgaa cttcgacagc ccatacagga accgtgctac tgcccccact
401 gtccacgtca caaatcgaaa acgggcctgg ataaacaggc ctatgtacag
451 aaagcccaca atgtacagga tgtatagaag cccagacata cctaggggct
501 gtgaaggccc atgtaaggtc cagtcgtttg agcagaggga tgatgtgaag
551 caccttggta tctgtaaggt gattagtgat gtgactcgtg ggcctgggct
601 gacacacagg gtcggaaaga ggttttgtat caagtccatt tacatacttg
651 gtaagatctg gatggatgaa aatattaaga agcaaaatca cactaataat
701 gtgatgtttt atctgcttag ggatagaagg ccttatggca atgcgcccca
751 agactttggg cagatattta atatgttcga taatgagccc agtactgcaa
801 caattaagaa cgatttgagg gataggtttc aggtattgag gaaatttcat
851 gccactgtta ttggtggtcc atctggcatg aaagagcagg ctttggtgaa
901 aaggttttac aggttgaatc atcacgtgac atataatcat caggaggcag
951 ggaagtatga gaatcacacg gagaatgctt tgcttctgta catggcatgt
1001 actcatgcct ccaatcctgt atatgcgacg ttgaaaatac gtatatactt
1051 ctatgacagt attggcaatt aataaacatt gaattttatt tcatgagtca
1101 actgacactc aatagttttg gcaattacat tgaacaaaac atgatcagca
1151 gctctaatga catcgttaat tgagataaca cctatattat ccaagtattt
1201 aagtacttgg tatctaaaga cccttaagaa aagaccagtc tgaggccgta
1251 aggtcgtcca gatcctgaag ttgagaaaac atttgtgaat ccccagcgcc
1301 ttcctcaggt tgtgattgaa tcgaacctgg actgttatga tgtcctggtt
1351 cagcaggaat ggtcgttgtt ggtgcctggt gattgtgaaa tacaggggat
1401 tgtttatttc ccaggtatac acgccattca ttgcttgagg agcagtgatg
1451 agttcccctg tgcgtaaatc catgattgga gcagttgata tggaggtaat
1501 atgaacagcc acagacacga tccactctcc tacaccggat ggctcgcttc
1551 ttgaattgtc tgtgactgac tttgattgga acctgagtag agtggttctg
1601 tgagggtgat gaagattgca ttctttaatg cccaggcctt tagcgcttct
1651 tgcttttcct cgtctaggaa ctctttatag gacgaggtag gtcctggatt
1701 gcagaggaag atagtgggaa ttccaccttt aatttgaacg ggtttcccgt
1751 atttcgtgtt ggactgccag tccctctggg accccatgaa ttccttaaag
1801 tgctttaggt agtggggatc gacgtcatca atgacgttgt accaggcagc
1851 attattgtat acctttggac taaggtccag gtgtccacac aggtaattgt
1901 gtgggcctaa agatctggcc catatcgtct tccctgttct gctagcacct
1951 tctattacaa tactattggg tctccatggc cgcgcagcgg aatccctaac
2001 attatcagcg acccattctt caatttcatc aggaacttgg tcaaaggaag
2051 aacatgagaa gggagaaata taaggagctg gtggctcctg gaaaatccta
2101 tctaaattac tattgagatt atgaaattga agtacaaagt cctttgggac
2151 taattcccta atgacattaa gagcttctga cttactgccg ctgttaaggc
2201 ctctggcgta agcatcattc gctgattgtt gaccgcctct agcagatcgt
2251 ccatcgatct gaaattgtcc ccattcgacg gtgtctccgt ccttatccaa
2301 ataggacttg acatctgagc ttgatttggc accttgaatg ttggggtgga
2351 aattggtgct acaggttggg tgtacacaat cgaagagacg attgttcgta
2401 atcgtgattt tcccctcgaa ttggatgagg gcatgcaggt gaggttcccc
2451 attctgatgc agctctctac agattttaat gaacttaggg tttgatggga
2501 gagatagtgt ttgaatgaat gacagcaggt gttctttggg tatagaacac
2551 tttgggtatg tgagaaagac attcttggct tgaactctaa aacgaggagt
2601 tcgcatgttg accaagtcaa ttggagacac tcaactagag acactcttga
2651 gcatctcctc ctgttaattg gagacattat ataggtgtct ctaaatggca
2701 ttcttgtaat aagttgaact ttaatttgaa ttaaaaggct caaaaggcgc
2751 ggaacaccca aggggccaac cgtataatat t