Sequence of DPV Euphorbia yellow mosaic virus
Euphorbia mosaic virus segment DNA B, complete sequence, isolate Brazil:Mato grosso do sul:1:2007
ACC No: FN435996
Dated: 2010-06-09 | Length: 2580 | CRC: -1430641608
ID FN435996; SV 1; circular; genomic DNA; STD; VRL; 2580 BP.
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AC FN435996;
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DT 09-JUN-2010 (Rel. 105, Created)
DT 09-JUN-2010 (Rel. 105, Last updated, Version 1)
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DE Euphorbia mosaic virus segment DNA B, complete sequence, isolate
DE Brazil:Mato grosso do sul:1:2007
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KW complete genome.
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OS Euphorbia mosaic virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
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RN [1]
RP 1-2580
RA Paprotka T.;
RT ;
RL Submitted (12-AUG-2009) to the EMBL/GenBank/DDBJ databases.
RL Paprotka T., Molecular Biology and Virology of Plants, University of
RL Stuttgart, Pfaffenwaldring 57, 70550 Stuttgart, GERMANY.
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RN [2]
RA Paprotka T., Metzler V., Jeske H.;
RT "The first DNA 1-like . . satellites in association with New World
RT begomoviruses in natural infections";
RL Virology 0:0-0(2010).
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FH Key Location/Qualifiers
FH
FT source 1. .2580
FT /organism="Euphorbia mosaic virus"
FT /segment="DNA B"
FT /host="Euphorbia sp."
FT /isolate="Brazil:Mato grosso do sul:1:2007"
FT /mol_type="genomic DNA"
FT /country="Brazil:Mato Grosso do Sul"
FT /lat_lon="20.24 S 56.38 W"
FT /collection_date="30-Nov-2007"
FT /db_xref="taxon:77811"
FT CDS 431. .1201
FT /gene="BV1"
FT /product="nuclear shuttle protein"
FT /protein_id="CBA18070.1"
FT /translation="MYTTKHRRGGSSSRRRGYPRHPAFKRVHNGKRSDWRRGPSSPYKA
FT HDESKMTAQCIHEDQFGPEFVLGHNIATSTYISYPSMSKTEPNRSRSYIKLRRLRFKGT
FT LKVERVHVDVNMIGSNPKIEGVFSMVVIIDRKPHLGPTGCLHTFDEVFGARIHSHGNLT
FT VSPSLKDRYYIRHVFTRVISVEKDTMMVDIEGSTCLSTRRSSCWATFKDTERESCNGVY
FT ANISKNAILVYYCWMSDHMSKASTFVSFDLDYVG"
FT CDS complement(1298. .2182)
FT /gene="BC1"
FT /product="movement protein"
FT /protein_id="CBA18071.1"
FT /translation="MEGSQLVIPPSAFNYIESHRDEYQLSHDLTEIVLQFPSTASQLGA
FT RLSRSCMKIDHCVIEYRQQVPINASGSVVVEIHDKRMTDNESLQASWTFPIRCNIDLHY
FT FSSSFFSLKDPIPWKLYYKVCDSNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKIL
FT SKQFSDKDIDFSHVGYGKWERRMIRSASSSRLGLQGPIEIRPGESWATRSTIGLGHLDA
FT DSDVRDAAYPYRELNRLGTPVLDPGDSASVVAAQRTHSNISMSMSQLNEIVRSTVQECI
FT STNCIPPRNKTLD"
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SQ Sequence 2580 BP; 719 A; 578 C; 573 G; 710 T; 0 other;
fn435996 Length: 2580 09-JUN-2010 Type: N Check: 1040 ..
1 accggatggc cgcgattttt tggtgtcctc tatccccggc ccaggcccaa
51 ccgcattaat ttgtatccgg gaccacacac atcatcaaaa gctgaccaat
101 cagactgcgc gtgacgtgtc tatttaaata caacttactt gacaagttgt
151 ggtccctata aatgtagatg acaacgacag cacatgaact ctttaatttt
201 aattaaaccc actttgtatg gcgggagcct ttagtcgttg tggtcctcaa
251 ccacaattcg aaataagctg tcgtcaagcc gacgtacatc cgagtcgctc
301 gagagcaacc tggtccaatc ataaacgtgg tacatagtct cgttaaccca
351 accggatacg tggactggtt atttaaggac gatatggatt ggactgcata
401 tcacatcatc tcgatcaacc attttataaa atgtatacga ctaagcatag
451 acgtggaggg tcatcttcta ggcgacgagg atatccacga catccagcgt
501 tcaagcgagt gcataatgga aaacgttccg actggagacg tggacctagc
551 agtccttata aggcccatga cgaatccaag atgacggccc aatgtataca
601 tgaagaccaa ttcggcccag aatttgtatt gggccataat atagcaacgt
651 cgacctatat tagctaccct agtatgagta agaccgaacc gaaccgatcc
701 cgatcgtata ttaagttgag gcgtctacgc tttaagggca ctctgaaggt
751 cgaacgtgta cacgtcgatg tcaacatgat cggttcgaat ccaaagatag
801 aaggcgtatt ctctatggtc gtcattatcg accgtaaacc tcacttgggt
851 ccaaccggat gccttcacac atttgatgaa gtctttggcg caaggatcca
901 cagtcatggt aatctaaccg tcagcccttc tttgaaggat cggtactaca
951 tccgccatgt attcacgcgc gtaatatctg tcgagaaaga cacaatgatg
1001 gtggatatag aagggtcgac gtgtttatct actaggcgtt cttcttgctg
1051 ggctactttt aaggatacgg aacgagagtc atgtaatggt gtatatgcga
1101 acataagcaa gaacgccata ttagtttatt attgctggat gtctgatcat
1151 atgtccaagg catctacatt tgtatcattt gacctcgact atgtcggatg
1201 accaataata acatatttaa caagcattta ttgcaatcga tacagcgtac
1251 atgcaaatga taacaaccct ctataattga attaaataat gtattattta
1301 atcaagcgtt ttatttctgg gaggaataca attagtgctg atacactcct
1351 gaacggttga cctaactatc tcgttcagct gactcattga catcgatatg
1401 ttcgaatgtg ttctctgagc agctactacg gaagctgaat ctcccgggtc
1451 tagtactgga gtccctaacc tatttaactc ccgatatgga taagcggcgt
1501 ctctcacatc tgaatccgca tctaaatggc ccagccctat agtagatctg
1551 gtggcccatg attcaccagg ccttatttca attgggcctt gtagcccaag
1601 tctcgatgat gatgcggatc taatcattct tctctcccat ttgccgtagc
1651 ccacatgact gaagtcgatg tccttatctg aaaactgttt cgacaggatc
1701 ttgacagttg gcgctctgaa agggatatca acggaatgct ttgccgtcga
1751 taacttcagt ttacccttaa acttcgcgaa atgcgtcctc tgatggacgt
1801 tcgagtcgca aaccttataa tacaatttcc aaggaattgg gtctttgagt
1851 gagaagaatg aagatgaaaa gtagtggaga tctatgttac atcttatggg
1901 gaatgtccat gacgcctgca aggactcatt gtccgtcatc ctcttgtcgt
1951 gaatctccac tactactgag cccgacgcat taattggcac ctgttgccta
2001 tactctatta cgcaatgatc gatcttcatg cagctgcgtg agagtcgggc
2051 tcctaattga gacgccgttg acgggaattg caagactatc tcagttaggt
2101 catgcgatag ctgatactcg tcacgatgtg actctatgta attgaaagcg
2151 ctcggcggaa ttactaactg agacccctcc attataatat ggaaactagc
2201 ccgcgcagcg gcaaccgttc ccccaaattg aacgactgag ggaaattgat
2251 aggtgccaac cttatggaag gacgatatgc gttagcgata ataatttggg
2301 gaaatttcta agatacgata agcctctgtg cagattacga tttaatcggc
2351 tggtaatttg agatgaagaa gtggaaattt gccgataggt tagctattga
2401 aggtctatat atagtcagtc agatgcgata tgctacaggc tgatggcaaa
2451 tttgtaaata taagccagga caccaggggg agtcctctct aaaacctatt
2501 ttcgtggtgt cctggtgtcc catttatact aaaagcctct aggacaccag
2551 ggggtacgtg gcggccatcc gtataatatt