Sequence of DPV Euphorbia yellow mosaic virus
Euphorbia mosaic virus segment DNA B, complete sequence, isolate Brazil:Mato grosso do sul:2:2007
ACC No: FN435998
Dated: 2010-06-09 | Length: 2587 | CRC: 1625868828
ID FN435998; SV 1; circular; genomic DNA; STD; VRL; 2587 BP.
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AC FN435998;
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DT 09-JUN-2010 (Rel. 105, Created)
DT 09-JUN-2010 (Rel. 105, Last updated, Version 1)
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DE Euphorbia mosaic virus segment DNA B, complete sequence, isolate
DE Brazil:Mato grosso do sul:2:2007
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KW complete genome.
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OS Euphorbia mosaic virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
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RN [1]
RP 1-2587
RA Paprotka T.;
RT ;
RL Submitted (12-AUG-2009) to the EMBL/GenBank/DDBJ databases.
RL Paprotka T., Molecular Biology and Virology of Plants, University of
RL Stuttgart, Pfaffenwaldring 57, 70550 Stuttgart, GERMANY.
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RN [2]
RA Paprotka T., Metzler V., Jeske H.;
RT "The first DNA 1-like . . satellites in association with New World
RT begomoviruses in natural infections";
RL Virology 0:0-0(2010).
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FH Key Location/Qualifiers
FH
FT source 1. .2587
FT /organism="Euphorbia mosaic virus"
FT /segment="DNA B"
FT /host="Euphorbia sp."
FT /isolate="Brazil:Mato grosso do sul:2:2007"
FT /mol_type="genomic DNA"
FT /country="Brazil:Mato Grosso do Sul"
FT /lat_lon="20.24 S 56.38 W"
FT /collection_date="30-Nov-2007"
FT /db_xref="taxon:77811"
FT CDS 431. .1201
FT /gene="BV1"
FT /product="nuclear shuttle protein"
FT /protein_id="CBA18077.1"
FT /translation="MYTTKYRRGGSSSRRRGYPRHPAFKRVHNGKRSDWRRGPSSPYKA
FT HDESKMTAQCIHEDQFGPEFVLGHNIATSTYISYPSMSKTEPNRSRSYIKLRRLRFKGT
FT LKVERVHVDVNMIGSNPKIEGVFSMVVIVDRKPHLGPTGCLHTFDEVFGARIHSHGNLT
FT VSPSLKDRYYIRHVFKRVISVEKDTMMVDIEGSTCLSTRRSSCWATFKDMERESCNGVY
FT ANISKNAILVYYCWMSDHISKASTFVSFDLDYVG"
FT CDS complement(1296. .2027)
FT /gene="BC1"
FT /product="movement protein"
FT /protein_id="CBA18078.1"
FT /translation="MKIDHCVIEYRQQVPINASGSVVVEIHDKRMTDNESLQASWTFPI
FT RCNIDLHYFSSSFFSLKDPIPWKLYYKVCDSNVHQRTHFAKFKGKLKLSTAKHSVDIPF
FT RAPTVKILSKQFSDKDIDFSHVGYGKWERRMIRSASSSRLGLQGPIEIRPGESWATRST
FT IGLGHLDADSDVRDAAYPYRELNRLGTPVLDPGDSASVVAAQRTHSNISMSMSQLNEIV
FT RSTVQECISTNCIPPRNKTLD"
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SQ Sequence 2587 BP; 728 A; 574 C; 571 G; 714 T; 0 other;
fn435998 Length: 2587 09-JUN-2010 Type: N Check: 2236 ..
1 accggatggc cgcgattttt tggtgtcctc tattccaggc ccaggcccaa
51 acgcatttag ttttatccgg gaccacacac agcaacaaaa gctgaccaat
101 cagaatgcgc gtgacgtgtc tatttaaata caacttactt gacaagttgt
151 ggtccctata aatgtagatg acaacgacag cacatgaact ctttaatttg
201 aattaagccc actttgtatg gcggaagcct tcagtcgttg tggtcctcaa
251 ccacaattcg aaataagctg tcgtcaagcc gacgtacatc cgagtcgctc
301 gagagcaacc tggtccaatc ataaacgtgg tacatagtct cgttaaccca
351 accggatacg tggactggtt atttaaggac aatatggatt ggactgcaca
401 tcacatcatc tcgatcaacc attttataaa atgtatacga ctaagtatag
451 acgtggaggg tcatcttcta ggcgacgagg atatccacga catccagcgt
501 tcaagcgagt gcataatgga aaacgttccg actggagacg tggacctagc
551 agtccttata aggcccatga cgaatccaag atgacggccc aatgtataca
601 tgaagaccaa ttcggcccag aatttgtatt gggccataat atagctacgt
651 cgacctatat tagctaccct agtatgagta agaccgaacc gaaccgatcc
701 cgatcgtata ttaagttgag gcgtctacgc tttaagggca ctctgaaggt
751 cgaacgtgta cacgtcgatg tcaacatgat cggttcgaat ccaaagatag
801 aaggcgtatt ctctatggtc gtcattgtcg accgtaaacc tcacttgggt
851 ccaaccggat gccttcacac atttgatgaa gtatttggcg caaggatcca
901 cagtcatggt aatctaaccg tcagcccttc tttgaaggat cggtactaca
951 tccgccatgt attcaagcgc gtaatatctg tcgagaaaga cacaatgatg
1001 gtggatatag aagggtcgac gtgtttatct actaggcgtt cttcttgctg
1051 ggctactttt aaggatatgg aacgagagtc atgtaatggt gtatatgcga
1101 acataagcaa gaacgccata ttagtttatt attgctggat gtctgatcat
1151 atttccaagg catctacatt tgtatcattt gacctcgact atgtcggatg
1201 accaataata acatatttaa taagcattta ttgcaatcga tacagcgtac
1251 atgcaaatga taacaactct ataattgaat taaatactgt attatttaat
1301 caagcgtttt atttctggga ggaatacaat tagtgctgat acactcctga
1351 acggttgatc taactatctc gttcagctga ctcattgaca tcgatatgtt
1401 cgaatgtgtt ctctgagcag ctactacgga agctgaatct cccgggtcta
1451 gtactggagt ccctaaccta tttaactccc gatatggata agcggcgtct
1501 ctcacatctg aatccgcatc taaatggccc agccctatag tagatctggt
1551 ggcccacgat tcaccaggcc ttatttcaat tgggccttgt agcccaagtc
1601 tcgatgatga tgcggatcta atcattcttc tctcccattt gccgtagccc
1651 acatgactga agtcgatatc cttatctgaa aactgtttcg acagaatctt
1701 gacagttggc gctctgaaag ggatatcaac ggaatgcttt gccgtcgata
1751 acttcagttt acccttaaac ttcgcgaaat gcgtcctctg atggacgttc
1801 gagtcgcaaa ccttataata caatttccaa ggaattgggt ctttgagtga
1851 gaagaatgaa gatgaaaagt agtggagatc tatgttacat cttatgggga
1901 atgtccatga cgcctgcaag gactcattgt ccgtcatcct cttgtcgtga
1951 atctccacta ctacggagcc cgacgcatta attggcacct gttgcctata
2001 ctctattacg caatgatcga tcttcatgca gctgcgtgag agtcgggctc
2051 ctaattgaga cgccgttgac gggaattgca agactatctc agttaggtca
2101 tgcgatagct gatactcgtc acgatgtgac tctatgtaat tgaaagcgct
2151 cggcggaatt actaactgag acccctccat tataatatgg aaactagccc
2201 gcgcagcggc accccttccc ccaaattgaa cgactgaggg aaattgatag
2251 gtgccaacct tatggaagga cgatatgctt tagcgataat aatttgggga
2301 aatttcttag atacgataag cctctgtgca gattacgatt taaccggctg
2351 gtaatttgag atgaagaatt agaaatttgc cgataggtta gctattgaag
2401 gtctatatat aggcagtcag atgcgatatg ctacaggctg acggcaaatt
2451 tgtaaatata agccaggaca ccatgggagt cctctctaaa acctattgtt
2501 tgtggtgtcc tggtgtccca tttatacata aagtctcttg gggaggtacc
2551 aggacaccag gggcaaaagc ggccatccta taatatt