Sequence of DPV Cucumber mosaic virus

Cucumber mosaic virus partial CP gene for coat protein, genomic RNA, isolate 24Huahine

ACC No: FN554695

Dated: 2009-09-29 | Length: 651 | CRC: 136592361

                
ID   FN554695; SV 1; linear; genomic RNA; STD; VRL; 651 BP.
XX
AC   FN554695;
XX
DT   29-SEP-2009 (Rel. 102, Created)
DT   29-SEP-2009 (Rel. 102, Last updated, Version 1)
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DE   Cucumber mosaic virus partial CP gene for coat protein, genomic RNA,
DE   isolate 24Huahine
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KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Bromoviridae;
OC   Cucumovirus.
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RN   [1]
RP   1-651
RA   Grisoni M.;
RT   ;
RL   Submitted (23-SEP-2009) to the EMBL/GenBank/DDBJ databases.
RL   Grisoni M., Cirad, UMR 53-PVBMT, 97410, 97410 Saint Pierre, REUNION.
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RN   [2]
RA   Farreyrol K., Grisoni M., Pearson M., Richard A., Cohen D., Beck D.;
RT   "Genetic diversity of Cucumber mosaic virus infecting vanilla in French
RT   Polynesia and Reunion Island";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .651
FT                   /organism="Cucumber mosaic virus"
FT                   /host="Commelina diffusa"
FT                   /isolate="24Huahine"
FT                   /mol_type="genomic RNA"
FT                   /country="French Polynesia"
FT                   /collected_by="M. Grisoni"
FT                   /collection_date="Jul-2002"
FT                   /db_xref="taxon:12305"
FT   CDS             <1. .>651
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="CBG22876.1"
FT                   /translation="DKSESTSAGRNRRRRPRRGSRSASSSADATFRVLSQQLSRLNKTL
FT                   AAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEFDKKLVS
FT                   RIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQANN
FT                   KLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGELPV"
XX
SQ   Sequence 651 BP; 145 A; 171 C; 157 G; 178 T; 0 other;

fn554695 Length: 651  29-SEP-2009  Type: N  Check: 8399  ..

       1  gacaaatctg aatcaaccag tgctggtcgt aaccgtcgtc gtcgtccgcg
      51  tcgtggttcc cgctccgctt cctcctccgc ggatgctacg ttcagagtct
     101  tgtcgcaaca gctttcgcga cttaataaga cgttagcagc tggtcgtcct
     151  actattaacc acccaacctt tgtgggtagt gagcgttgta aacctggata
     201  cacgttcact tcgattaccc tgaagccacc aaaaatagac cgggggtctt
     251  attatggtaa aaggttgttg cttcccgatt cggtcactga gttcgataag
     301  aagcttgttt cgcgcattca aattcgagtt aatcctttgc cgaaatttga
     351  ttctaccgtg tgggtgacgg tccgtaaagt tcctgcctcc tcggacctgt
     401  ccgttgccgc catctctgct atgtttgcgg acggagcctc accggtactg
     451  gtttatcagt acgccgcatc cggagttcaa gctaacaaca aattgttgta
     501  tgatctttcg gcgatgcgcg ctgatattgg cgacatgaga aagtacgccg
     551  tactcgtgta ttcaaaagac gatgcactcg agacggatga gctagtactt
     601  catgtcgaca ttgagcacca acgaattccc acatctgggg agctcccagt
     651  t