Sequence of DPV Tomato leaf curl Palampur virus

Tomato leaf curl Palampur virus AV1 gene for coat protein and AC5 gene

ACC No: FN555137

Dated: 2010-09-07 | Length: 925 | CRC: -1858113298

                
ID   FN555137; SV 1; linear; genomic DNA; STD; VRL; 925 BP.
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AC   FN555137;
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DT   07-SEP-2010 (Rel. 106, Created)
DT   07-SEP-2010 (Rel. 106, Last updated, Version 1)
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DE   Tomato leaf curl Palampur virus AV1 gene for coat protein and AC5 gene
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KW   .
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OS   Tomato leaf curl Palampur virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC   unclassified Begomovirus.
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RN   [1]
RP   1-925
RA   Ali I.;
RT   ;
RL   Submitted (28-SEP-2009) to the EMBL/GenBank/DDBJ databases.
RL   Ali I., Agricultural Biotechnology Division, National Institute for
RL   Biotechnology and Genetic Engng, Jhung Road, P O. 577, Faisalabad, Punjab,
RL   PAKISTAN.
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RN   [2]
RA   Ali I., Malik A.H., Mansoor S.;
RT   "First Report of Tomato leaf curl Palampur virus on Bitter Gourd in
RT   Pakistan";
RL   Plant Dis. 94(2):276-276(2010).
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FH   Key             Location/Qualifiers
FH
FT   source          1. .925
FT                   /organism="Tomato leaf curl Palampur virus"
FT                   /host="Memordica charantia L."
FT                   /mol_type="genomic DNA"
FT                   /country="Pakistan:Faisalabad"
FT                   /isolation_source="host leaf"
FT                   /db_xref="taxon:526476"
FT   CDS             29. .799
FT                   /transl_table=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /protein_id="CBG76456.1"
FT                   /translation="MVKRPADIYISTPASKARRRLNFDSPYAVRAAVPIVRATKAREWV
FT                   NRPMNRKPRFYRMYRSSDVPRGCEGPCKVQSFESRHDVSHIGKVMCISDVTRGTGLTHR
FT                   VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPTGAPQDFGEVFNMFDNEP
FT                   STATVKNMHRDRYQVLKKWHSTVTGGTYASKEQALVKRFIRVNNYVVYNQQEAGKYENH
FT                   TENALMLYMACTHPSNPVYATLKIRIYFYDSVTN"
FT   CDS             complement(59. .577)
FT                   /transl_table=1
FT                   /gene="AC5"
FT                   /product="AC5 protein"
FT                   /protein_id="CBG76457.1"
FT                   /translation="MPFFEHLISITMHILHSSSARFVVEHIKHFAEILWRTRRSPITHQ
FT                   KEHNTIRVVLRLNILVHPDLAQHVDGLHTESLSDAMCETSSTGNVANTHDLTNMGDIVP
FT                   GFKRLHLTWAFTAPGHVRASIHPVKSWFPVHGSVDPFPCLCGADNRDSCTDSIRAVEVQ
FT                   TTACFRCGR"
XX
SQ   Sequence 925 BP; 265 A; 201 C; 205 G; 254 T; 0 other;

fn555137 Length: 925  07-SEP-2010  Type: N  Check: 7208  ..

       1  ctaatctctg tcgtccgtgc cagaaactat ggtgaagcgt ccagcagata
      51  tctacatttc aacgcccgca tcgaaagcac gccgtcgtct gaacttcgac
     101  agcccgtatg ctgtccgtgc agctgtccct attgtccgcg ccacaaaggc
     151  aagggaatgg gtcaacagac ccatgaaccg gaaaccaaga ttttaccgga
     201  tgtatcgaag ctctgacgtg cccaggggct gtgaaggccc atgtaaggtg
     251  caatcttttg aatccaggca cgatgtctcc catattggta aggtcatgtg
     301  tattagcgac gttacccgtg gaactggtct cacacatcgc gtcggaaagc
     351  gattctgtgt gaagtccgtc tacgtgctgg gcaagatctg gatggacgag
     401  aatattaaga cgaagaacca cacgaatagt gttatgttct ttttggtgcg
     451  tgatcggcga cctacgggtg cgccacaaga tttcggcgaa gtgtttaata
     501  tgttcgacaa cgaacctagc actgctactg tgaagaatat gcatcgtgat
     551  cgatatcaag tgctcaaaaa atggcattcg actgtgacgg gaggaacata
     601  cgcgtcgaag gaacaagcat tagttaaacg ttttattaga gttaataatt
     651  acgttgtata taatcaacaa gaggccggca agtatgagaa tcatactgaa
     701  aatgcattaa tgttgtatat ggcctgtact catccatcaa atcctgtata
     751  tgcgacttta aaaatccgga tctattttta tgattcggta acaaattaat
     801  atgtattcag ttttacatca tatgttgccc atacatcaac tgttctttgc
     851  aatacattgt ctaatacatg ataagctgct cttattacat tattaattct
     901  ataacaccta gcatatccag gtacc