Sequence of DPV Bhendi yellow vein mosaic virus

Bhendi yellow vein mosaic virus AC4 gene for regulatory protein, clone 10a1-RCA-AV-p

ACC No: FN645921

Dated: 2012-02-23 | Length: 1109 | CRC: 1965084111

                
ID   FN645921; SV 1; linear; genomic DNA; STD; VRL; 1109 BP.
XX
AC   FN645921;
XX
DT   08-FEB-2010 (Rel. 103, Created)
DT   23-FEB-2012 (Rel. 111, Last updated, Version 2)
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DE   Bhendi yellow vein mosaic virus AC4 gene for regulatory protein, clone
DE   10a1-RCA-AV-p
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KW   .
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OS   Bhendi yellow vein mosaic virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN   [1]
RP   1-1109
RA   Thompson J.R.;
RT   ;
RL   Submitted (07-DEC-2009) to the INSDC.
RL   Thompson J.R., International Centre for Genetic Engineering and
RL   Biotechnology (ICGEB), Via Piovega 23, Ca'Tron di Roncade, 31056 (TV),
RL   ITALY.
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RN   [2]
RA   Zaffalon V., Mukherjee S.K., Reddy V.S., Thompson J.R., Tepfer M.;
RT   "A survey of geminiviruses and associated satellite DNAs in the
RT   cotton-growing areas of northwestern India";
RL   Arch. Virol. 0:0-0(2011).
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1109
FT                   /organism="Bhendi yellow vein mosaic virus"
FT                   /segment="A"
FT                   /host="Abelmoschus esculentus"
FT                   /mol_type="genomic DNA"
FT                   /country="India:Haryana"
FT                   /collection_date="Sep-2007"
FT                   /clone="10a1-RCA-AV-p"
FT                   /db_xref="taxon:120168"
FT   CDS             complement(159. .467)
FT                   /gene="AC4"
FT                   /product="regulatory protein"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:D3HIN0"
FT                   /protein_id="CBJ17692.1"
FT                   /translation="MKMGNLICTCSSSSRGNTSARISDSSTWSPQAGQHISIRTYRELN
FT                   PAPTSNPTSTRTGTLSSGESFRSTDDLLEGDNRQPTTLTPQRLTQAVSQRLLESLRS"
XX
SQ   Sequence 1109 BP; 287 A; 238 C; 257 G; 327 T; 0 other;

fn645921 Length: 1109  23-FEB-2012  Type: N  Check: 3817  ..

       1  gtcgacaacg ttctcggcag cccattcctc aagttcttcc ggaacttgat
      51  caaaagaaga agaagaaaaa ggagaaacat aaacctccac aggaggtgta
     101  aaaatcctat ctaaattagc atttaaatta tggaattgta atacataatc
     151  ttttggagct aactccttaa tgactctaag agcctctgac ttactgcctg
     201  cgttaagcgc tgcggcgtaa gcgtcgttgg ctgtctgttg tccccctcta
     251  gcagatcgtc cgtcgatctg aaactctccc cactcgagag tgtccccgtc
     301  cttgtcgatg taggatttga cgtcggagct ggatttagct ccctgtatgt
     351  tcggatggaa atgtgctgac ctgcttgggg agaccaggtc gaagaatcgc
     401  tgattctggc acttgtattt cccctcgaac tggatgagca cgtgcagatg
     451  aggttcccca ttttcatgaa gttctctgca gattttaata tatttttttg
     501  aagtgggggt ttggaaattc ttgatttggg aaagtgcttc ttctttggtg
     551  agagagcact tgggataagt gaggaaataa tttttggagt taataaggaa
     601  acgcttagga ggcatgttga ctaagataga ggacccgatt gaccgctctt
     651  gcaactctcc cctgtatatc gggtctcaat atatagtgag acccaaatgg
     701  caaaattgta attgtgggaa taaattcaaa atcctcacgc tccaaaaagc
     751  ggccatccgt ataatattac cggatggccg cgcgattttt tttagtggtg
     801  ggtccagaac gcacgactat gcagactcaa accttagata acgctccttt
     851  cgctataagt acttgcgcac taagtttcaa attgaaacat gtgggatcca
     901  ttgttaaacg agttccctga gacggttcac gggtttcgtt gcatgcttgc
     951  tattaaatat cttcaacaac tgtctgagga atactctcct gatacggttg
    1001  ggtacgatct aattcgcgat ctaatttcta ttttacgttg taggaattat
    1051  gtcgaagcgt cctgccgata tcgtcatttc tacccccgcg tcgaaggtgc
    1101  gtcgtcgac