Sequence of DPV Cotton leaf curl Burewala virus

Cotton leaf curl Burewala virus AV1 gene for coat protein, clone LG-RCA-AI-p

ACC No: FN645934

Dated: 2012-02-23 | Length: 1182 | CRC: 1647280929

                
ID   FN645934; SV 1; linear; genomic DNA; STD; VRL; 1182 BP.
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AC   FN645934;
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DT   08-FEB-2010 (Rel. 103, Created)
DT   23-FEB-2012 (Rel. 111, Last updated, Version 2)
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DE   Cotton leaf curl Burewala virus AV1 gene for coat protein, clone
DE   LG-RCA-AI-p
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KW   .
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OS   Cotton leaf curl Burewala virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC   unclassified Begomovirus.
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RN   [1]
RP   1-1182
RA   Thompson J.R.;
RT   ;
RL   Submitted (07-DEC-2009) to the INSDC.
RL   Thompson J.R., International Centre for Genetic Engineering and
RL   Biotechnology (ICGEB), Via Piovega 23, Ca'Tron di Roncade, 31056 (TV),
RL   ITALY.
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RN   [2]
RA   Zaffalon V., Mukherjee S.K., Reddy V.S., Thompson J.R., Tepfer M.;
RT   "A survey of geminiviruses and associated satellite DNAs in the
RT   cotton-growing areas of northwestern India";
RL   Arch. Virol. 0:0-0(2011).
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1182
FT                   /organism="Cotton leaf curl Burewala virus"
FT                   /segment="A"
FT                   /host="Gossypium hirsutum"
FT                   /mol_type="genomic DNA"
FT                   /country="India:Punjab"
FT                   /collection_date="Sep-2007"
FT                   /clone="LG-RCA-AI-p"
FT                   /db_xref="taxon:620894"
FT   CDS             156. .926
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:D3HIR0"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:D3HIR0"
FT                   /protein_id="CBJ17734.1"
FT                   /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKAKAWA
FT                   NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR
FT                   VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP
FT                   STATVKNVHRDRYQVLRKWYATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENH
FT                   SENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
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SQ   Sequence 1182 BP; 351 A; 213 C; 270 G; 348 T; 0 other;

fn645934 Length: 1182  23-FEB-2012  Type: N  Check: 8749  ..

       1  ggatccactg ttaaatgagt tccccgacac cgttcacggt tttaggtgta
      51  tgttagcagt taaatatttg cagttagtag agaaaactta ctctcctgat
     101  acattgggtt acgatttgat aagggattta atcctggtaa taagggctag
     151  gaattatgtc gaagcgacca gcagatataa tcatttccac gcccgcttcg
     201  aaggtacgcc gccgtctcaa cttcgacagc ccatatgtga gccgtgctgc
     251  tgcccccatt gtccgcgtca ccaaagcaaa agcatgggcg aacaggccca
     301  tgaacagaaa gcccaggatg tacaggatgt acagaagtcc agatgttcct
     351  agaggatgtg aaggtccatg taaggttcag tcgtttgagt ccagacatga
     401  tattcagcat ataggtaaag taatgtgtgt tagtgatgtt actcgtggta
     451  ctgggctgac ccatagagtt ggtaagagat tttgtgttaa gtctgtttat
     501  gtgttgggta agatctggat ggatgagaac attaagacga agaatcacac
     551  gaatagtgtg atgtttttct tggttagaga tcgtagacct gttgataaac
     601  ctcaagattt tggagaggta tttaatatgt ttgataatga gcccagtacg
     651  gcgactgtga agaatgttca tcgtgatagg tatcaagttc tgcgcaaatg
     701  gtatgcaact gtcaccggtg gacaatacgc ttcaaaggaa caagctctcg
     751  tgaagaaatt tattagagtt aataattatg ttgtgtataa ccagcaggaa
     801  gctggcaagt atgagaatca ttctgagaat gctttaatgt tgtatatggc
     851  gtgtactcac gcctctaacc cagtgtatgc taccttgaag atacggatct
     901  acttctatga ttccgtgaca aattaataaa tattgaattt tattgaagat
     951  gattggtcta caaatacaac atgttgtaat acattccata atacatgatc
    1001  aactgctcta actacattat taatactgac aattcctaag ttatttaaat
    1051  atttaagcac ttgagtccta aagaccctta agaaacgacc agtcggaggc
    1101  tgtgaggtca tccagattcg gaaagctatg aaacatttgt gtatccccaa
    1151  cgcttttctc aggttgtgat tgaactggat cc