Sequence of DPV Rice stripe virus

Rice stripe virus NS3 gene, genomic RNA, isolate AH-DJ

ACC No: FN650792

Dated: 2010-01-13 | Length: 878 | CRC: -1456823745

                
ID   FN650792; SV 1; linear; genomic RNA; STD; VRL; 878 BP.
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AC   FN650792;
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DT   13-JAN-2010 (Rel. 103, Created)
DT   13-JAN-2010 (Rel. 103, Last updated, Version 1)
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DE   Rice stripe virus NS3 gene, genomic RNA, isolate AH-DJ
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KW   .
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OS   Rice stripe virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
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RN   [1]
RP   1-878
RA   Jiang T.;
RT   ;
RL   Submitted (09-JAN-2010) to the EMBL/GenBank/DDBJ databases.
RL   Jiang T., Anhui Aagriculture University, College of Plant Protection,
RL   Changjiang West Road 130, Hefei, Anhui, 230036, CHINA.
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RN   [2]
RA   Jia L., Jiang T.;
RT   "Cloning and sequence analysis of NS3 of Rice stripe virus(RSV) derived
RT   from Anhui Province";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .878
FT                   /organism="Rice stripe virus"
FT                   /segment="RNA3"
FT                   /host="Oryza sativa"
FT                   /isolate="AH-DJ"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Anhui"
FT                   /db_xref="taxon:12331"
FT   CDS             27. .662
FT                   /codon_start=1
FT                   /gene="ns3"
FT                   /product="NS3 protein"
FT                   /protein_id="CBJ04648.1"
FT                   /translation="MNVFTSSVGSVEFDHPLLLENDLTSLSINCDDVHCSSRALCYIYD
FT                   IHSSRHPSIDEHQFLRLLHGPDDAVTLGSFLKTLIWILSHDKNLPEEYRLPTIMMSSSY
FT                   VKFFTEVKPRPPSTNCWTCRMSKDNLPFTVPSVKGFPPDAELYIVPISDHDGKPVKFDN
FT                   RKTLYRSPSKKRHKYVISSDKPPLSARYVKYVDSSALEPSPGSSPAVL"
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SQ   Sequence 878 BP; 301 A; 185 C; 150 G; 242 T; 0 other;

fn650792 Length: 878  13-JAN-2010  Type: N  Check: 3356  ..

       1  caatacaatt ccgacatcat ctaagtatga acgtgttcac atcgtctgta
      51  ggttctgtgg aatttgatca tcctctgctt ttggagaatg atctaaccag
     101  tttgagcata aactgtgatg atgtccattg ttcttcaaga gccttatgtt
     151  atatatatga cattcattca tctaggcacc cttccattga tgagcatcag
     201  tttctgaggc ttcttcatgg ccctgatgat gctgtcactc taggctcctt
     251  cttgaaaact ctgatctgga ttctgtccca tgataagaat ctcccagaag
     301  agtacagact tcctactata atgatgtcat cctcatatgt gaagttcttc
     351  actgaagtga agccaagacc cccatcaaca aattgctgga catgcagaat
     401  gtccaaagac aatctgccct ttacagttcc tagtgtcaag ggatttcctc
     451  cagatgcaga gctctacatt gtgccaatat ctgaccatga tggaaagcct
     501  gtcaaatttg acaataggaa gactctatat agatcaccta gtaagaaaag
     551  gcataagtat gtcatttctt ctgataaacc acctcttagt gcacgttatg
     601  ttaagtacgt tgattctagt gcactagaac cctcaccagg cagctctcca
     651  gctgtgctgt agaaataaaa aagaaaaaaa gaaaaaagaa aataaaacaa
     701  ttaatcaaaa aaacaaaaaa atcttaaaaa tgaaaaacaa aaaaaccaaa
     751  aaactaaaaa actaaaaaaa ctaaaaaaca tcatgaccta agaaactgca
     801  caccactggt tgtctagtgg gctctagttg gtagagaaag ctatgctttt
     851  gcctaaagcc atgattggcc aatcctta