Sequence of DPV Rice stripe virus

Rice stripe virus NS3 gene, genomic RNA, isolate AH-FX

ACC No: FN650793

Dated: 2010-01-13 | Length: 897 | CRC: -1125629224

                
ID   FN650793; SV 1; linear; genomic RNA; STD; VRL; 897 BP.
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AC   FN650793;
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DT   13-JAN-2010 (Rel. 103, Created)
DT   13-JAN-2010 (Rel. 103, Last updated, Version 1)
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DE   Rice stripe virus NS3 gene, genomic RNA, isolate AH-FX
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KW   .
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OS   Rice stripe virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
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RN   [1]
RP   1-897
RA   Jiang T.;
RT   ;
RL   Submitted (09-JAN-2010) to the EMBL/GenBank/DDBJ databases.
RL   Jiang T., Anhui Aagriculture University, College of Plant Protection,
RL   Changjiang West Road 130, Hefei, Anhui, 230036, CHINA.
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RN   [2]
RA   Jia L., Jiang T., Ding F., Song P.P.;
RT   "Cloning and sequence analysis of NS3 of Rice stripe virus(RSV) derived
RT   from Anhui Province";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .897
FT                   /organism="Rice stripe virus"
FT                   /segment="RNA3"
FT                   /host="Oryza sativa"
FT                   /isolate="AH-FX"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Anhui"
FT                   /db_xref="taxon:12331"
FT   CDS             27. .662
FT                   /gene="NS3"
FT                   /product="NS3 protein"
FT                   /protein_id="CBJ04649.1"
FT                   /translation="MNVFTSSVGSVEFDHPLLLENDLTSLSINCDDVHCSSRALCYIYD
FT                   IHSSRHPSIDEHQFLRLLHGPDDAVTLGSFLKTLIWILSHDKNLPEEYRLPTIMMSSSY
FT                   VKFFTEVKPRPPSTNCWTCRMSKDNLPFTVPSVKGFPPDAELYIVPISDHDGKPVKFDN
FT                   RKTLYRSPSKKRHKYVISSDKPPLSARYVKYVDSSALEPSPGSSPAVL"
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SQ   Sequence 897 BP; 312 A; 189 C; 153 G; 243 T; 0 other;

fn650793 Length: 897  13-JAN-2010  Type: N  Check: 7504  ..

       1  caatacaatt ccgacatcat ctaagtatga acgtgttcac atcgtctgtg
      51  ggttctgtgg aatttgatca tcctctgctt ttggagaatg atctgaccag
     101  tttgagcata aactgtgatg atgtccattg ttcttcaaga gccttatgtt
     151  atatatatga cattcattca tccaggcacc cctccattga tgagcatcag
     201  tttctgaggc ttcttcatgg ccctgatgat gctgtcactc taggctcctt
     251  cttgaaaact ctgatctgga ttctgtccca tgataagaat ctcccagaag
     301  agtacagact tcctactata atgatgtcat cctcttatgt gaagttcttc
     351  actgaagtga agccaagacc cccatctaca aattgctgga catgcagaat
     401  gtccaaagac aatttgccct ttaccgttcc tagtgtcaag gggtttcctc
     451  cagatgcaga gctctacatt gtgccaatat ctgaccatga tggaaagcct
     501  gtcaaatttg acaataggaa gactctatat agatcaccta gtaagaaaag
     551  gcataagtat gtcatttctt ctgacaaacc acctcttagt gcacgttatg
     601  ttaagtacgt tgattctagt gcactagaac cctcaccagg cagctctcca
     651  gctgtgctgt agaaataaaa agaaaaaaag aaaaaaagaa aaaagaaaat
     701  aaaacaaata atcaaaaaac aaaaaaatct taaaaatgaa aaacacaaaa
     751  aaactaaaaa actaaaaaaa ctaaaaaaac taaaaaaact aaaaaacatc
     801  atgacctaaa aaaactacac accactggtt gtctagtggg ctctagttgg
     851  tagagaaagc tatgcttttg cctaaagcca tgattggccg atcctta