Sequence of DPV Rice stripe virus

Rice stripe virus NS3 gene, genomic RNA, isolate AH-MG

ACC No: FN650797

Dated: 2010-01-13 | Length: 876 | CRC: -2053354747

                
ID   FN650797; SV 1; linear; genomic RNA; STD; VRL; 876 BP.
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AC   FN650797;
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DT   13-JAN-2010 (Rel. 103, Created)
DT   13-JAN-2010 (Rel. 103, Last updated, Version 1)
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DE   Rice stripe virus NS3 gene, genomic RNA, isolate AH-MG
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KW   .
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OS   Rice stripe virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
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RN   [1]
RP   1-876
RA   Jiang T.;
RT   ;
RL   Submitted (09-JAN-2010) to the EMBL/GenBank/DDBJ databases.
RL   Jiang T., Anhui Aagriculture University, College of Plant Protection,
RL   Changjiang West Road 130, Hefei, Anhui, 230036, CHINA.
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RN   [2]
RA   Ding F., Jia L., Song P.P., Jiang T.;
RT   "Cloning and sequence analysis of NS3 of Rice stripe virus(RSV) derived
RT   from Anhui Province";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .876
FT                   /organism="Rice stripe virus"
FT                   /segment="RNA3"
FT                   /host="Oryza sativa"
FT                   /isolate="AH-MG"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Anhui"
FT                   /db_xref="taxon:12331"
FT   CDS             27. .662
FT                   /gene="NS3"
FT                   /product="NS3 protein"
FT                   /protein_id="CBJ04653.1"
FT                   /translation="MNVFTSSVGSVEFDHPLLLENDLTSLSINCDDVHCSSRALCYIYD
FT                   IHSSRHPSIDEHQFLRLLHGPDDAVTLGSFLKTLIWILSHDKNLPEEHRLPTIMMSSSY
FT                   VEFFTEVKPRPPSTNCWTCRMSKDNLPFTVPSVKGFPPDAELYIVPISDHDGKPVKFDN
FT                   RKTLYRSPSKKRHKYVISSDKPPLSARYVKYVDSSALEPSPGSSPAVL"
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SQ   Sequence 876 BP; 295 A; 184 C; 155 G; 242 T; 0 other;

fn650797 Length: 876  13-JAN-2010  Type: N  Check: 676  ..

       1  caatacaatt ccgacatcat ctaagtatga acgtgttcac atcgtctgta
      51  ggttctgtgg aatttgatca tcctctgctt ctggagaatg atctgaccag
     101  tttgagcata aactgtgatg atgtccattg ttcttcaaga gccttatgtt
     151  atatatatga cattcattca tctaggcacc cctccattga tgagcatcag
     201  tttctgaggc ttcttcatgg ccctgatgat gctgtcactc taggctcctt
     251  cttgaaaact ctgatttgga ttctgtctca tgataagaat ctcccagaag
     301  agcacagact tcctactata atgatgtcat cctcatatgt ggagttcttc
     351  actgaggtga agccaagacc cccatcaaca aattgctgga catgcagaat
     401  gtccaaagac aatttgccct ttaccgttcc tagtgtaaag ggatttcccc
     451  cagatgcaga gctctatatt gtgccaatat ctgaccatga tggaaagcct
     501  gtcaaatttg acaataggaa gactctatat agatcaccta gcaagaaaag
     551  gcataagtat gtcatttctt ctgataaacc acctcttagt gcacgttatg
     601  ttaagtatgt tgattctagt gcattggagc cctcaccagg cagctctcca
     651  gctgtgctgt agaaataaaa aagaaaaagg aaaaagaaaa taaaacaaat
     701  aatcaaaaaa acacaaaaaa atcttaaaaa tgaaaaacac aaaaaaaact
     751  aaaaaactaa aaaaactaaa aaaaacatca tgacctaaaa aaactgcaca
     801  ccactggttg tctagtgggc tctagttggt agagaaagct atgcttttgc
     851  ctaaagccat gattggccaa tcctta