Sequence of DPV Rice stripe virus

Rice stripe virus NS3 gene, genomic RNA, isolate AH-TC

ACC No: FN650799

Dated: 2010-01-13 | Length: 870 | CRC: 969067500

                
ID   FN650799; SV 1; linear; genomic RNA; STD; VRL; 870 BP.
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AC   FN650799;
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DT   13-JAN-2010 (Rel. 103, Created)
DT   13-JAN-2010 (Rel. 103, Last updated, Version 1)
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DE   Rice stripe virus NS3 gene, genomic RNA, isolate AH-TC
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KW   .
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OS   Rice stripe virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
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RN   [1]
RP   1-870
RA   Jiang T.;
RT   ;
RL   Submitted (09-JAN-2010) to the EMBL/GenBank/DDBJ databases.
RL   Jiang T., Anhui Aagriculture University, College of Plant Protection,
RL   Changjiang West Road 130, Hefei, Anhui, 230036, CHINA.
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RN   [2]
RA   Ding F., Jia L., Song P.P., Li R., Jiang L., Jiang T.;
RT   "Cloning and sequence analysis of NS3 of Rice stripe virus(RSV) derived
RT   from Anhui Province";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .870
FT                   /organism="Rice stripe virus"
FT                   /segment="RNA3"
FT                   /host="Oryza sativa"
FT                   /isolate="AH-TC"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Anhui"
FT                   /db_xref="taxon:12331"
FT   CDS             27. .662
FT                   /gene="NS3"
FT                   /product="NS3 protein"
FT                   /protein_id="CBJ04655.1"
FT                   /translation="MNVFTSSVGSVEFDHPLLLENDLTSLSINCDDVHCSSRALCYIYD
FT                   IHSSRHPSIDEHQFLRLLHGPDDAVTLGSFLKTLIWILSHDKNLPEEHRLPTIMMSSSY
FT                   VKFFTEVKPRPPSTNCWTCRMSKDNLPFTVPSVKGFPPDAELYIVPISDHDGKPVKFDN
FT                   RKTLYRSPSKKRHKYVISSDKPPLSARYVKYVDSSVLEPSPGSSPAVL"
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SQ   Sequence 870 BP; 291 A; 186 C; 152 G; 241 T; 0 other;

fn650799 Length: 870  13-JAN-2010  Type: N  Check: 1302  ..

       1  caatacaatt ccgacatcat ctaagtatga acgtgttcac atcgtctgtg
      51  ggttctgtgg aatttgatca tcctctgctt ttggagaatg atctgaccag
     101  tttgagcata aactgtgatg atgtccattg ttcttcaaga gccttatgtt
     151  atatatatga cattcattca tctaggcacc cttccattga tgagcatcag
     201  tttctgaggc ttcttcatgg ccctgatgat gctgtcactc taggctcctt
     251  cttgaaaact ctgatctgga ttctgtctca tgataagaat ctcccagaag
     301  agcacagact tcctactata atgatgtcat cctcatatgt gaagttcttc
     351  actgaagtga agccaagacc cccatcaaca aattgctgga catgcagaat
     401  gtccaaagac aatttgccct ttaccgttcc tagtgtcaag ggatttcctc
     451  cagatgcaga gctctacatt gtgccaatat ctgaccatga tggaaagcct
     501  gtcaaatttg acaataggaa gactctatat agatcaccta gtaagaaaag
     551  gcataagtat gtcatttctt ccgataaacc acctcttagt gcacgttatg
     601  ttaagtacgt tgattctagt gtactagaac cctcaccagg cagctctcca
     651  gctgtgctgt agaaataaaa agaaaaaaga aaagaaaata aaacaaataa
     701  tcaaaaaaca caaaaaaatc ttaaaaatga aaaacacaaa aaaaccaaaa
     751  aactaaaaaa aactaaaaaa catcatgacc taagaaactg cacaccactg
     801  gttgtctagt gggctctagt tggtagagaa agctatgctt ttgcctaaag
     851  ccatgattgg ccaatcctta