Sequence of DPV Rice stripe virus

Rice stripe virus NS3 gene, genomic RNA, isolate AH-WJ

ACC No: FN650800

Dated: 2010-01-13 | Length: 870 | CRC: -1797324667

                
ID   FN650800; SV 1; linear; genomic RNA; STD; VRL; 870 BP.
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AC   FN650800;
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DT   13-JAN-2010 (Rel. 103, Created)
DT   13-JAN-2010 (Rel. 103, Last updated, Version 1)
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DE   Rice stripe virus NS3 gene, genomic RNA, isolate AH-WJ
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KW   .
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OS   Rice stripe virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
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RN   [1]
RP   1-870
RA   Jiang T.;
RT   ;
RL   Submitted (09-JAN-2010) to the EMBL/GenBank/DDBJ databases.
RL   Jiang T., Anhui Aagriculture University, College of Plant Protection,
RL   Changjiang West Road 130, Hefei, Anhui, 230036, CHINA.
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RN   [2]
RA   Ding F., Jia L., Song P.P., Li R., Jiang L., Jiang T.;
RT   "Cloning and sequence analysis of NS3 of Rice stripe virus(RSV) derived
RT   from Anhui Province";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .870
FT                   /organism="Rice stripe virus"
FT                   /segment="RNA3"
FT                   /host="Oryza sativa"
FT                   /isolate="AH-WJ"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Anhui"
FT                   /db_xref="taxon:12331"
FT   CDS             27. .662
FT                   /gene="NS3"
FT                   /product="NS3 protein"
FT                   /protein_id="CBJ04656.1"
FT                   /translation="MNVFTSSVGSVEFDHPLLLENDLTSLSINCDDVHCSSRALCYIYD
FT                   IHSSRHPSIDEHQFLRLLHGPDDAVTLGSFLKTLIWILSHDKNLPEEYRLPTIMMSSSY
FT                   VKFFTEVKPRPPSTNCWTCRMSKDNLPFTVPSVKGFPPDAELYIVPISDHDGKPVKFDN
FT                   RKTLYRSPSKKRHKYVISSDKPPLSARYVKYVDSSALEPSPGSSPAVL"
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SQ   Sequence 870 BP; 292 A; 187 C; 152 G; 239 T; 0 other;

fn650800 Length: 870  13-JAN-2010  Type: N  Check: 9698  ..

       1  caatacaatt ccgacatcat ctaagtatga acgtgttcac atcgtctgtg
      51  ggttctgtgg aatttgatca tcctctgctt ttggagaatg atctgaccag
     101  tttgagcata aactgtgatg atgtccactg ttcctcaaga gccttatgtt
     151  atatatatga cattcattca tctaggcacc cttccattga tgagcatcag
     201  tttctgaggc ttcttcatgg ccctgatgat gctgtcactc taggctcctt
     251  cttgaaaact ctgatctgga ttctgtccca tgataagaat ctcccagaag
     301  agtacagact tcctactata atgatgtcat cctcatatgt gaagttcttc
     351  actgaagtga agccaagacc cccatcaaca aattgctgga catgcagaat
     401  gtccaaagac aatttgccct ttaccgttcc tagtgtcaag ggatttcctc
     451  cagatgcaga gctctacatt gtgccaatat ctgaccatga tggaaagcct
     501  gtcaaatttg acaataggaa gactctatat agatcaccta gtaagaaaag
     551  gcataagtat gtaatttctt ctgataaacc acctcttagt gcacgttatg
     601  ttaagtacgt tgattctagt gcactagaac cctcaccagg cagctctcca
     651  gctgtgctgt agaaataaaa aggaaaaaga aaaaagaaaa taaaacaaat
     701  aatcaagaaa acacaaaaaa atcttaaaaa tgaaaaacac aaaaaaacca
     751  aaaaactaaa aaaactaaaa aacatcatga cctaaaaact gcacaccact
     801  ggttgtctag tggctctagt tggtagagaa agctatgctt ttgcctaaag
     851  ccatgattgg ccaatcctta