Sequence of DPV Rice stripe virus

Rice stripe virus NS3 gene, genomic RNA, isolate AH-XC

ACC No: FN650802

Dated: 2010-01-13 | Length: 869 | CRC: -1765545202

                
ID   FN650802; SV 1; linear; genomic RNA; STD; VRL; 869 BP.
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AC   FN650802;
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DT   13-JAN-2010 (Rel. 103, Created)
DT   13-JAN-2010 (Rel. 103, Last updated, Version 1)
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DE   Rice stripe virus NS3 gene, genomic RNA, isolate AH-XC
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KW   .
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OS   Rice stripe virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
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RN   [1]
RP   1-869
RA   Jiang T.;
RT   ;
RL   Submitted (09-JAN-2010) to the EMBL/GenBank/DDBJ databases.
RL   Jiang T., Anhui Aagriculture University, College of Plant Protection,
RL   Changjiang West Road 130, Hefei, Anhui, 230036, CHINA.
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RN   [2]
RA   Ding F., Jia L., Song F., Li R., Jiang L., Jiang T.;
RT   "Cloning and sequence analysis of NS3 of Rice stripe virus (RSV) derived
RT   from Anhui Province";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .869
FT                   /organism="Rice stripe virus"
FT                   /segment="RNA3"
FT                   /host="Oryza sativa"
FT                   /isolate="AH-XC"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Anhui"
FT                   /db_xref="taxon:12331"
FT   CDS             27. .662
FT                   /gene="NS3"
FT                   /product="NS3 protein"
FT                   /protein_id="CBJ04659.1"
FT                   /translation="MNVFTSSVGSVEFDHPLLLENDLTSLSINCDDVHCSSRALCYIYD
FT                   IHSSRHPSIDEHQFLRLLHGPDDAVTLGSFLKTLIWILSHDKNLPEEYRLPTIMMSSSY
FT                   VKFFTEVKPRPPSTNCWTCRMSKDNLPFTVPSVKGFPPDAELYIVPISDHDGKPVKFDN
FT                   RKTLYRSPSKKRHKYVISSDKPPLSARYVKYVDSSALEPSPGSSPAVL"
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SQ   Sequence 869 BP; 290 A; 188 C; 152 G; 239 T; 0 other;

fn650802 Length: 869  13-JAN-2010  Type: N  Check: 8508  ..

       1  caatacaatt ccgacatcat ctaagtatga acgtgttcac atcgtctgtg
      51  ggttctgtgg aatttgatca tcctctgctt ttggagaatg atctgaccag
     101  tttgagcata aactgtgatg atgtccattg ttcttcaaga gccttatgtt
     151  atatatatga cattcattca tctaggcacc cttccattga tgagcatcag
     201  tttctgaggc tccttcatgg ccctgatgat gctgtcactc taggctcctt
     251  cttgaaaact ctgatctgga ttctgtccca tgataagaat ctcccagaag
     301  agtacagact tcctactata atgatgtcat cctcatatgt gaagttcttc
     351  actgaagtga agccaagacc cccatcaaca aattgctgga catgcagaat
     401  gtccaaagac aatttgccct ttaccgttcc tagtgtcaag ggatttcctc
     451  cagatgcaga gctctacatt gtgccaatat ctgaccatga tggaaagcct
     501  gtcaaatttg acaataggaa gactctatat agatcaccta gtaagaaaag
     551  gcataagtat gtcatttctt ctgataaacc accccttagt gcacgttatg
     601  ttaagtacgt tgattctagt gcactagaac cctcaccagg cagctctcca
     651  gctgtgctgt agaaataaaa agaaaaaaag aaaaaagaaa ataaaacaaa
     701  taatcaaaaa aacacaaaaa atcttaaaaa tgaaaaacac aaaaaccaaa
     751  aaactaaaaa actaaaaaac atcatgacct gaaaaactgc acaccactgg
     801  ttgtctagtg ggctctagtt ggtagagaaa gctatgcttt tgcctaaagc
     851  catgattggc caatcctta