Sequence of DPV Rice stripe virus

Rice stripe virus NS3 gene, genomic RNA, isolate AH-YS

ACC No: FN650804

Dated: 2010-01-13 | Length: 872 | CRC: 453170049

                
ID   FN650804; SV 1; linear; genomic RNA; STD; VRL; 872 BP.
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AC   FN650804;
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DT   13-JAN-2010 (Rel. 103, Created)
DT   13-JAN-2010 (Rel. 103, Last updated, Version 1)
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DE   Rice stripe virus NS3 gene, genomic RNA, isolate AH-YS
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KW   .
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OS   Rice stripe virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
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RN   [1]
RP   1-872
RA   Jiang T.;
RT   ;
RL   Submitted (09-JAN-2010) to the EMBL/GenBank/DDBJ databases.
RL   Jiang T., Anhui Aagriculture University, College of Plant Protection,
RL   Changjiang West Road 130, Hefei, Anhui, 230036, CHINA.
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RN   [2]
RA   Ding F., Jia L., Song P.P., Li R., Jiang L., Jiang T.;
RT   "Cloning and sequence analysis of NS3 of Rice stripe virus (RSV) derived
RT   from Anhui Province";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .872
FT                   /organism="Rice stripe virus"
FT                   /segment="RNA3"
FT                   /host="Oryza sativa"
FT                   /isolate="AH-YS"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Anhui"
FT                   /db_xref="taxon:12331"
FT   CDS             27. .662
FT                   /gene="NS3"
FT                   /product="NS3 protein"
FT                   /protein_id="CBJ04661.1"
FT                   /translation="MNVFTSSVGSVEFDHPLLLENDLTSLSINCDDVHCSSRALCYIYD
FT                   IHSSRHPSIDEHQFLRLLHGPDDAVTLGSFLKTLIWILSHDKNLPEEYRLPTIMMSSSY
FT                   VKFFTEVKPRPPSTNCWTCKMSKDNLPFTVPSVKGFPPDAELYIVPISDHDGKPVKFDN
FT                   RKTLYRSPSKKRHKYVISSDKPPLSARYVKYVDSSALEPSPGSSPAVL"
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SQ   Sequence 872 BP; 290 A; 188 C; 153 G; 241 T; 0 other;

fn650804 Length: 872  13-JAN-2010  Type: N  Check: 3049  ..

       1  caatacaatt ccgacatcat ctaagtatga acgtgttcac atcgtctgtg
      51  ggttctgtgg aatttgatca tcctctgctt ttggagaatg atctgaccag
     101  tttgagcata aactgtgatg atgtccattg ttcttcaaga gccttatgtt
     151  atatatatga cattcattca tctaggcacc cttccattga tgagcatcaa
     201  tttctgaggc ttcttcatgg ccctgatgat gctgtcactc taggctcctt
     251  cttgaaaact ctgatctgga ttctgtccca tgataagaat ctcccagaag
     301  agtacagact tcctactata atgatgtcat cctcatatgt gaagttcttc
     351  actgaagtga agccaagacc cccatcaaca aactgctgga catgcaaaat
     401  gtccaaagac aatttgccct ttactgttcc tagtgtcaag ggatttcctc
     451  ctgatgcaga gctctacatt gtgccaatat ctgaccatga tggaaagcct
     501  gtcaaatttg acaataggaa gaccctatat agatcaccta gtaagaaaag
     551  gcataagtat gtcatttctt ctgataaacc acctcttagt gcacgttatg
     601  ttaagtacgt tgattctagt gcactagaac cctcaccagg cagctctcca
     651  gctgtgctgt agaaataaaa agaaaaaagg aaaaagaaaa taaaacaaag
     701  aatctaaaaa acacaaaaaa atcttaaaaa tgaaaaacac aaaaaaacca
     751  aaaaactaaa aaaactaaaa aacatcatga cctaggaacc tgcacaccac
     801  tggttgtcta gtgggctcta gttggtagag aaagctatgc ttttgcctaa
     851  agccatgatt ggccaatcct ta