Sequence of DPV Sweet potato leaf curl virus
Sweet potato leaf curl virus DNA-A, isolate Y338
ACC No: FN806776
Dated: 2010-04-21 | Length: 2801 | CRC: -1536984871
ID FN806776; SV 1; circular; genomic DNA; STD; VRL; 2801 BP.
XX
AC FN806776;
XX
DT 21-APR-2010 (Rel. 104, Created)
DT 21-APR-2010 (Rel. 104, Last updated, Version 1)
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DE Sweet potato leaf curl virus DNA-A, isolate Y338
XX
KW complete viral segment.
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OS Sweet potato leaf curl virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2801
RA Li J.;
RT ;
RL Submitted (11-APR-2010) to the EMBL/GenBank/DDBJ databases.
RL Li J., Zhejiang University, Institute of Biotechnology, NO. 268, Kaixuan
RL Road, Hangzhou, Zhejiang, 310029, CHINA.
XX
RN [2]
RA Li J., Zhou X.;
RT "Molecular characterization of Sweet potato leaf curl virus in China";
RL Unpublished.
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FH Key Location/Qualifiers
FH
FT source 1. .2801
FT /organism="Sweet potato leaf curl virus"
FT /segment="DNA A"
FT /isolate="Y338"
FT /mol_type="genomic DNA"
FT /country="China:Yunnan province"
FT /lat_lon="24 N 97.5 E"
FT /isolation_source="Ipomoea indica"
FT /collected_by="Xue-ping Zhou"
FT /collection_date="17-Aug-2008"
FT /db_xref="taxon:100755"
FT CDS 98. .442
FT /gene="AV2"
FT /product="AV2 protein"
FT /protein_id="CBL58136.1"
FT /translation="MAELWDPLQNPLPDTLYGFRCMLSVKYLQGILKKYEPGTLGFELC
FT SELIRIFRVRQYDRANSRFAEISSLWGETGKTEAELRDSYRALHWECCPNCCPKLCPGF
FT KRRSDEEKEG"
FT CDS 267. .1031
FT /gene="AV1"
FT /product="coat protein"
FT /protein_id="CBL58137.1"
FT /translation="MTGRIRVSPRYHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV
FT PVSRGVRMKRKRGDRIPKGCVGPCKIQDYEFKMDVPHTGTFVCVSDFTRGTGLTHRLGK
FT RVCIKSMGIDGKVWMDDNVAKRDHTNIITYWLLRDRRPNKDPLNFGQVFTMYDNEPTTA
FT KIRMDLRDRMQVLKKFSVTVSGGPYSHKEQALVRKFFKGLYNHVTYNHKEEAKYENQLE
FT NALMLYSASSHASNPVYQTLRCRAYFYDSHNN"
FT CDS complement(1047. .1481)
FT /gene="AC3"
FT /product="AC3 protein"
FT /protein_id="CBL58138.1"
FT /translation="MDSRTGESLSHAQTTRALEFGTNPMSVGRTAPFHLRIMYVHESTQ
FT GKTILKFQLMVNYRERMQLGFHKIFLQFRILTTRLTGAFHSWTGILERLKRRICNELAN
FT LGLFSLVNLVFVIRYLPRVCFWIDEIDTVDCNDDVKVLLY"
FT CDS complement(1198. .1644)
FT /gene="AC2"
FT /product="AC2 protein"
FT /protein_id="CBL58139.1"
FT /translation="MSNPISGYKRKCPIQEPLHTEAKKGKKKVPEQRTRIVWKGCGCSA
FT FITTTCKYQHGFTHRGITKSCSDYESTRIRHQPHVCGSDCTVPSQNNVCPREHTGENHP
FT QIPADGQLQGKDATGIPQNLPPIPDLDDPSNWCFSQLDWYFGTP"
FT CDS complement(1553. .2647)
FT /gene="AC1"
FT /product="replication protein"
FT /protein_id="CBL58140.1"
FT /translation="MAPPQRFKIQAKNYFITYPRCSLSKEDCLSQLLNIQTPTNKKYIH
FT IARELHEDGEPHLHVLVQFEGKFVCTNSRFFDLVSPTRSNHFHPNIQGAKSSSDVKSYV
FT DKDGDTLTWGEFQIDGRSARGGQQTANDAAAEALNAGSKEAALQIIREKLPEKYLFQFH
FT NLVSNLDRIFSPPPSVYSSPFSSSSFNAVPDIISDWAAENVMDSAARPDRPISIVIEGP
FT SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDW
FT QSNCKYGKPVQIKGGIPAIFLCNPGEGSSFKLWLDKPEQEALKNWATANAIFCDVQSHF
FT WVQEEVSHSGATAHRGEEGQEESS"
FT CDS complement(2233. .2490)
FT /gene="AC4"
FT /product="AC4 protein"
FT /protein_id="CBL58141.1"
FT /translation="MGNLTSMCWCSSKVNSSAQIADSSTLYHPQGRITFTPTSRELNPR
FT PMSSPTLTRTEIPSPGVNSRSTADLLEEVSRLLTTLPQRH"
XX
SQ Sequence 2801 BP; 738 A; 591 C; 680 G; 792 T; 0 other;
fn806776 Length: 2801 21-APR-2010 Type: N Check: 6307 ..
1 accggtgccc gccgcggccc ccttttgtgg gccccacacg gagataatga
51 cattgcttta taaggaccaa tcaggttgcc gtgcttggcg cccaagtatg
101 gctgaattgt gggaccctct tcagaaccca ctaccagata ctttatacgg
151 cttcaggtgt atgctctccg taaaatacct acaaggtatt ttgaagaaat
201 acgagccagg aaccctaggg ttcgagctct gttcggagtt aatccgtata
251 ttcagggtca ggcagtatga cagggcgaat tcgcgtttcg ccgagatatc
301 atccctatgg ggggagaccg gtaagacgga ggctgaactt cgagacagct
351 atcgtgccct acactgggaa tgctgtccca attgctgccc gaagctatgt
401 cccggtttca agaggcgttc ggatgaagag aaagaggggt gaccgcatcc
451 cgaagggatg tgtgggtccc tgtaagatcc aggactatga gttcaagatg
501 gacgttcccc acacgggaac gtttgtctgt gtctcggatt ttacaagggg
551 tactggtctt actcatcgcc tgggtaagcg tgtttgtatt aagtccatgg
601 gtatagatgg taaggtatgg atggatgaca atgtggccaa gagagatcac
651 accaacatca tcacgtattg gttgcttcgt gatagaaggc ccaataagga
701 tccgcttaac tttggtcagg ttttcactat gtacgacaat gagcccacta
751 ctgctaagat ccgaatggat ctgagggata gaatgcaggt gttgaagaag
801 ttctctgtta cagtttcagg tggtccatac agccacaagg aacaggcttt
851 agttaggaag ttctttaagg gtttgtataa tcatgttact tacaatcaca
901 aggaagaagc taagtatgag aaccagttag agaatgcgtt gatgttgtat
951 agtgctagca gtcatgctag taatcctgtg tatcagaccc tgcgttgcag
1001 ggcttatttc tatgactcgc acaataatta ataaaattat aatttattaa
1051 tacagtaata cctttacatc atcattgcag tctacagtat ctatttcatc
1101 tatccaaaaa cacactcttg gaagatatct aataacaaaa actaaattaa
1151 ctaaactaaa taaccctaaa tttgctaatt cattacatat gcgccgttta
1201 aggcgttcca aaataccagt ccaactgtga aaagcaccag ttagacgggt
1251 cgtcaagatc cggaattgga ggaagatttt gtggaatccc agttgcatcc
1301 tttccctgta gttgaccatc agctggaatt tgaggatggt tttcccctgt
1351 gtgctctcgt ggacatacat tattctgaga tggaacggtg cagtccgacc
1401 cacagacatg gggttggtgc cgaattctag tgctctcgta gtctgagcat
1451 gacttagtga ttcccctgtg cgtgaatcca tgctggtact tgcaggttgt
1501 ggtgatgaag gctgaacagc cgcaaccctt ccacactatc ctcgtcctct
1551 gttcaggaac tttcttcttg cccttcttcg cctctgtgtg cagtggctcc
1601 tgaatgggac acttcctctt gtacccagaa atgggattgg acatcgcaga
1651 atatagcgtt tgctgttgcc caattcttga gtgcttcctg ctctggtttg
1701 tccaaccaga gtttaaatga ggagccctct cctggattgc agagaaagat
1751 tgcgggaatt ccacctttaa tttgaactgg cttcccgtac ttacagttgg
1801 attgccagtc tttctgggcc cccatgaatt ccttaaagtg ctttaggtat
1851 tgggggttga cgtcatcaat gacattatac caagcactgt tgctgtaaac
1901 ttttgggctt agatctaaat gcccacacaa ataattgtga gggcccaaag
1951 acctggccca tactgtcttg cctattctgc ttgggccttc aataacaatt
2001 gatatgggtc tatccggccg cgcagcggaa tccatgacat tttcagcggc
2051 ccagtcgctg ataatgtcag gaacggcatt gaaagaagaa gaagaaaaag
2101 gggaagaata tacagaaggt ggaggagaaa aaatcctatc taaattagaa
2151 actaaattat gaaattgaaa taaatatttt tcagggagtt tctccctgat
2201 tatttgcaac gcagcttctt tagaacctgc gtttaatgcc tctgcggcag
2251 cgtcgttagc agtctgctga cctcctctag cagatctgcc gtcgatctgg
2301 aattcacccc aggtgagggt atctccgtcc ttgtcaacgt aggacttgac
2351 atcggacgag gatttagctc cctggatgtt ggggtgaaag tgattcgacc
2401 ttgtgggtga tacaaggtcg aagaatctgc tatttgtgca gacgaattta
2451 ccttcgaact gcaccagcac atggaggtga ggttccccat cctcgtgcag
2501 ttctctggcg atatgtatgt attttttgtt tgttggggtt tggatgttaa
2551 gaagttggga gaggcagtcc tctttagaga gagaacatcg tggataagta
2601 atgaaatagt ttttggcttg gattttaaaa cgttgcggag gagccatttg
2651 gagacactca taagttcaaa tgaattggag actggagaca atatatagta
2701 tgtctccaaa tggcattttg gtaaattaga agatcctttt agctttaatt
2751 caaattccga caatcttgga cccaccaaaa ggcgggcacc gtattaatat
2801 t