Sequence of DPV Rice grassy stunt virus

Rice grassy stunt virus segment 1, 18.9 kDa protein, isolate Baclieu, genomic RNA

ACC No: FN868438

Dated: 2010-09-07 | Length: 913 | CRC: 113297953

                
ID   FN868438; SV 1; linear; genomic RNA; STD; VRL; 913 BP.
XX
AC   FN868438;
XX
DT   07-SEP-2010 (Rel. 106, Created)
DT   07-SEP-2010 (Rel. 106, Last updated, Version 1)
XX
DE   Rice grassy stunt virus segment 1, 18.9 kDa protein, isolate Baclieu,
DE   genomic RNA
XX
KW   .
XX
OS   Rice grassy stunt virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN   [1]
RP   1-913
RA   Hoang H.T.T.;
RT   ;
RL   Submitted (18-MAY-2010) to the EMBL/GenBank/DDBJ databases.
RL   Hoang H.T.T., Institute of Biotechnology, Plant Cell of Biotechnology, 18
RL   Hoang Quoc Viet, Cau Giay, Hanoi, 10000, VIET NAM.
XX
RN   [2]
RA   Hoang H.T.T., Hoang T.T.P., Dang T.L.A., Nguyen C.N., Nguyen N.T., Le B.T.,
RA   Chu H.H.;
RT   "Genetic variety of rice grassy stunt virus strains isolated in Vietnam";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .913
FT                   /organism="Rice grassy stunt virus"
FT                   /segment="1"
FT                   /host="Oryza sativa"
FT                   /isolate="Baclieu"
FT                   /mol_type="genomic RNA"
FT                   /country="Viet Nam:Bac Lieu Province"
FT                   /isolation_source="host leaf tissue lysate"
FT                   /db_xref="taxon:66266"
FT   CDS             166. .666
FT                   /product="18.9 kDa protein"
FT                   /protein_id="CBM40418.1"
FT                   /translation="MGYYHSKTDNPKLITTKIRKYKVFSIPVKTQVIIITGSTLSLEFF
FT                   TLQTWIHLQEGFILEMGVRSTNGVLKIVNTICQENGKIERDRWDWHGCADSGLRKVHYD
FT                   EGIARSERTSIRVDIQGTSFVLTVDGHILGVYDVNSCINAINIGLEVLPNSNNTLDFDL
FT                   IYH"
XX
SQ   Sequence 913 BP; 307 A; 155 C; 169 G; 282 T; 0 other;

fn868438 Length: 913  07-SEP-2010  Type: N  Check: 2403  ..

       1  acacaaagtc ctggacaaca aaaacaaaaa aactctttaa tcaatatttc
      51  gtttctctta agtattaact ttaaatataa ttataaagat tgtgtattcc
     101  tcaacaacag aggagttctc tatctacctt ataacagttt tattaaaatt
     151  tattcttgcg atagtatggg ttactatcac tccaagactg ataatccaaa
     201  attgataact acaaaaataa ggaagtacaa agtattctca attcctgtta
     251  aaactcaggt cattatcatt actggatcaa ctctctcatt agaattcttc
     301  acactacaaa catggataca cctccaagag ggttttatct tagaaatggg
     351  tgtcagatct acaaacggtg tgctgaaaat agttaacact atttgtcaag
     401  agaatgggaa gatagagcgt gataggtggg attggcacgg ttgtgcggat
     451  agtggtttgc gcaaggttca ttatgatgaa gggatagcta gatctgagag
     501  aacaagcata agggttgata ttcaaggtac ctcatttgtg ttgactgtag
     551  atgggcacat acttggggtg tatgatgtta atagctgtat caatgccata
     601  aacattggtt tggaagtttt gccaaattca aataatacgc tggattttga
     651  tttaatatat cactaagaaa atacttatat taaaggtgag tattaattaa
     701  atatcggata tgggccgaag cccatatatc caatcacatg tccaatattc
     751  tccagcataa tccaaacata caaactagaa catgtatgac ctacctctgc
     801  cccttcttcc tctccctctt gaagaaggcg ggttataagt gggaaattgt
     851  gaatcaggta catcatacat aaattgtaga atccttttgt agtgcattga
     901  actcgctggc agt