Sequence of DPV East African cassava mosaic virus

East African cassava mosaic virus, partial DNA-A segment, partial AC2 gene for activator of transcription protein, isolate EACMV-Ybi Ligasa-Single

ACC No: FR675787

Dated: 2010-09-15 | Length: 405 | CRC: -1467901336

                
ID   FR675787; SV 1; circular; genomic DNA; STD; VRL; 405 BP.
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AC   FR675787;
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DT   15-SEP-2010 (Rel. 106, Created)
DT   15-SEP-2010 (Rel. 106, Last updated, Version 1)
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DE   East African cassava mosaic virus, partial DNA-A segment, partial AC2 gene
DE   for activator of transcription protein, isolate EACMV-Ybi Ligasa-Single
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KW   .
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OS   East African cassava mosaic virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN   [1]
RP   1-405
RA   Monde G.;
RT   ;
RL   Submitted (01-AUG-2010) to the EMBL/GenBank/DDBJ databases.
RL   Monde G., Earth & Life Institute Applied Microbiology-Phytopathology,
RL   Universite Catholique de Louvain, croix du sud 2 bte3, 1348
RL   Louvain-la-neuve, BELGIUM.
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RN   [2]
RA   Monde G., Walangululu J., Winter S., Bragard C.;
RT   "Cassava mosaic begomoviruses are related to the principal agroecosystems
RT   in Democratic Republic of Congo";
RL   Unpublished.
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RN   [3]
RA   Monde G.;
RT   "Molecular epidemiology of cassava mosaic begomoviruses in Yangambi,
RT   North-eastern Democratic Republic of Congo";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .405
FT                   /organism="East African cassava mosaic virus"
FT                   /segment="DNA-A"
FT                   /host="Manihot esculenta Crantz"
FT                   /isolate="EACMV-Ybi Ligasa-Single"
FT                   /mol_type="genomic DNA"
FT                   /country="Democratic Republic of the Congo:Ligasa
FT                   village,Province orientale"
FT                   /isolation_source="host leaves"
FT                   /collected_by="Monde Godefroid"
FT                   /collection_date="28-Jan-2009"
FT                   /identified_by="Monde Godefroid"
FT                   /db_xref="taxon:62079"
FT   CDS             1. .>405
FT                   /gene="AC2"
FT                   /product="activator of transcription protein"
FT                   /protein_id="CBW43050.1"
FT                   /translation="MPSSSPSQSHCTLVPIKVHHRPVKNRAIRRRRVDLECGCSFYLHI
FT                   DCINHGFSHRGTHHCASSKEWRFYLGNNKSPVFRNHRAPQEAREHEPGHHHTPGSVQPQ
FT                   PSEGIGDSQMFSQLKSLDDLTASDWSFLKSI"
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SQ   Sequence 405 BP; 110 A; 115 C; 85 G; 95 T; 0 other;

fr675787 Length: 405  15-SEP-2010  Type: N  Check: 5174  ..

       1  atgccatctt catcaccctc ccagagccac tgtactctag tgcccatcaa
      51  agtccatcac cgcccagtca agaacagggc catcagacgt aggagggtag
     101  atcttgaatg cggctgctcg ttttatctcc atatcgactg catcaatcat
     151  ggattttcgc acaggggaac tcatcactgc gcctcaagca aggaatggcg
     201  tttttacctg ggaaataaca aatcccctgt atttcgaaat caccgagcac
     251  cacaagaggc cagggaacat gaaccaggac atcatcacac tccaggttcg
     301  gttcaaccac aaccttcgga aggcattggg gattcacaaa tgttttctca
     351  actcaagtcc ctggacgacc ttacggcctc agactggtcg tttcttaaga
     401  gtatt