Sequence of DPV Rice grassy stunt virus
Rice grassy stunt virus segment RNA3 p3v and p3c genes, genomic RNA, isolate Longan
ACC No: FR696598
Dated: 2010-12-05 | Length: 3124 | CRC: -1517621746
ID FR696598; SV 1; linear; genomic RNA; STD; VRL; 3124 BP.
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AC FR696598;
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DT 05-DEC-2010 (Rel. 107, Created)
DT 05-DEC-2010 (Rel. 107, Last updated, Version 1)
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DE Rice grassy stunt virus segment RNA3 p3v and p3c genes, genomic RNA,
DE isolate Longan
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KW .
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OS Rice grassy stunt virus
OC Viruses; ssRNA negative-strand viruses; Tenuivirus.
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RN [1]
RP 1-3124
RA Hoang H.T.T.;
RT ;
RL Submitted (05-OCT-2010) to the EMBL/GenBank/DDBJ databases.
RL Hoang H.T.T., Plant Cell of Biotechnology, Institute of Biotechnology, 18
RL Hoang Quoc Viet, Cau Giay, Hanoi, 10000, VIET NAM.
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RN [2]
RA Hoang H.T.T., Lam N.D., Nguyen C.N., Chu H.H.;
RT "Genetic variation of Rice grassy stunt virus strains isolated in Vietnam";
RL Unpublished.
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FH Key Location/Qualifiers
FH
FT source 1. .3124
FT /organism="Rice grassy stunt virus"
FT /segment="RNA3"
FT /lab_host="Escherichia coli DH5-alpha"
FT /isolate="Longan"
FT /mol_type="genomic RNA"
FT /country="Viet Nam:Long An Province, Cuulong River Delta"
FT /isolation_source="rice leaf tissue lysate"
FT /db_xref="taxon:66266"
FT CDS 160. .747
FT /gene="p3v"
FT /product="hypothetical protein"
FT /protein_id="CBX26658.1"
FT /translation="MSLSSSSSMDIYGNVRPQNWTADDERYMLSLSGLRRFLEYIPHSD
FT RLTVLNWTRHMAANDIQIGALNAFRKKVCDIMYETKDKRINNELMKLYNELWSKTSSIY
FT NITPCTTCEIYKKELSQRVPESNIRYETQFIDSRVPIYQFLTPNNVSVVLVQHGNDLPD
FT LNFPRYVPLGQPRHKIAYYSDSRMIGQFLRID"
FT CDS complement(2131. .2949)
FT /gene="p3c"
FT /product="hypothetical protein"
FT /protein_id="CBX26659.1"
FT /translation="MFSLSDFLSEIGNVIREVEDKDNKEYEDQIREIQNLHRDMNHVEL
FT KVSENIKKACPEFTETEVNLNSNNTIIDLKDNALTEYKEVVWKIDNDESVDMPKDTVKE
FT MEFKNKDDELIISFTLDLDQNVCNGSSDCNVSNAKKSGNGENFLETRTDMIPPIDTSDC
FT YHINEILNNGTYEKIAIFSNPITINLDDGRKLIKVTIEDENIKKKVEASVKEITCIPIY
FT KLGNGGDYDSVISNCMSMDGVIKKLTETLIIYCSLDDVFSWLILKSVPND"
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SQ Sequence 3124 BP; 1107 A; 481 C; 510 G; 1026 T; 0 other;
fr696598 Length: 3124 05-DEC-2010 Type: N Check: 4809 ..
1 acacaaagtc ctgggcaaac aacaaagcaa aaaatcttcc taaaagcaaa
51 gttcactttt ggttcttctt cttttcttat ctcacatact cttaaacttc
101 atctttctga tttcttctcc caagaatctt ggattaatta gaggtctttt
151 cagaatttca tgtcacttag ttcaagtagt tcaatggata tctatggaaa
201 cgttagacca caaaactgga cagctgatga tgaaaggtat atgctttcct
251 tatcaggtct cagaaggttc ttagagtaca taccacattc tgatagattg
301 actgttctga attggactag acacatggct gcaaatgata tacagattgg
351 ggctctaaat gcattcagaa agaaggtttg tgatatcatg tatgagacca
401 aggacaagag aataaataat gaactgatga aactttacaa tgagttgtgg
451 agcaagacta gtagcatata caatataaca ccctgcacta cttgtgaaat
501 ttataagaaa gagttaagtc aaagggtgcc tgaaagtaat ataagatatg
551 aaacacaatt tatagatagt agggttccaa tttatcaatt cttgactccc
601 aataatgtta gtgttgttct tgtccaacat ggaaatgatc taccagacct
651 taacttccct agatatgttc ctttgggtca accaagacac aagattgctt
701 attattctga ctcaaggatg atagggcagt tcttaagaat agattagtat
751 ttgatatcaa gaaagtggct ccacactgtg tatggaagga agacaattat
801 gaatggttgg aatatgaggt atttataaat atgagaatgg tttgctagta
851 taggtaatga aaatcagcac ctagaatctg gatagcagag agaagagaat
901 ggagaacaaa aaaacaaaca aaaaaacagg aaaacaaaaa aacaaaaaaa
951 catatgaaaa tggaaaaaca aaaaaacagt gaatatgaac tgaaaacaca
1001 aagaaattat atatacatat atatatatat aaatatataa aaataaaaag
1051 agaataaaca acaaaaacac gggtaagaac taagagattg tgggtagtgg
1101 tatataagaa ctggtcaagc aatatgggaa tggaaaaact aaaacactat
1151 atataaatgt gaaaattagt gtaatgagta tatctaataa actgacttcg
1201 gtcagtatcc gatatatttt aaaatttaga tggtgatctg ggctagttat
1251 gtgtaaatgg gataaataat cactgattga atagagtcat aatctggtat
1301 aataaactaa cccgcagatg gagactaata ctccaaatat tcaaattatt
1351 gcctaatatc attgagaaag tgagtggttt aaataacgtg aattgaatta
1401 gaagttagat tgagttgttt tttacataag agttgcttga taccatacat
1451 tttaaattgg ataaaggcta tagcctttat ggacctagat tgaacctgaa
1501 gtatgggaat aaggaaaagg aaaaaataga attttctaat ttagattatt
1551 aattactata aagcccaaaa gaataatcag tgatttttaa aatattaaag
1601 aaatattatt gataactgta attaagtctc agcaagatga cctcttaaat
1651 gcatgagttt aattcaagga aaatatagac taatctatct atgaggagag
1701 aaatgtcagt agagtatctt agaccaacaa taggtgattt tgaagaattt
1751 ctttgtaacg ttatcataga tgaagtacaa tctattctct gtgttcaggg
1801 cgaagtttgt gtagtcattc ctttggtatt tccactcact agttacaaat
1851 cataatagtg cttcagttat tgactatatt gatgcttttg tcatcttcca
1901 gtttaacgat tgggggggtg ttttcgccaa actaaagata ccaaagctgc
1951 aatcattagt tcaataaact agagctctca attatgactt ttacattaag
2001 tatacccatc aattacctat tcatctacta tttcttaaac agatatgtta
2051 cttgaggtag tcatctaaat caattatcta cttatatact gtctcttaaa
2101 caaataagtt gcttgaagta gtcacttgat tcaatcatta ggtactgact
2151 tcagtatcag ccagctgaac acatcatcta gtgaacagta tatgattaat
2201 gtctcagtaa gtttcttaat gacaccatcc atgctcatac aattactaat
2251 aacactatca taatcacctc catttcctaa tttatagatg ggaatgcatg
2301 taatttcttt gacactagcc tctaccttct tcttgatatt ttcatcttct
2351 attgtcactt ttattagctt acgaccatca tctaaattta ttgtgatagg
2401 attactaaag attgctattt tttcatatgt tccattgttg agaatctcat
2451 tgatatgata acaatctgaa gtgtcaattg gcggtatcat gtcagtgcgt
2501 gtttccagaa aattttctcc atttccactt tttttagcat tggaaacatt
2551 acagtcagaa ctcccattgc agacattttg atcaagatct aaggtgaagg
2601 atataattaa ctcatcatcc ttattcttaa attccatctc ctttactgtg
2651 tccttgggca tatcaactga ttcatcatta tcaattttcc atactacttc
2701 tttatactct gttagtgcat tatcttttaa atcaattatt gtgttatttg
2751 aatttaaatt tacctcagtc tcagtaaact caggacaagc cttctttatg
2801 ttttcactga cttttaattc aacatgattc atatccctat gtaggttctg
2851 tatttcccga atctggtctt catactcctt attatcttta tcttcaacct
2901 cacggataac attgcctatt tcagacagaa agtctgaaag tgaaaacatt
2951 atgcaataag actggttgat agtggattat attcaattaa gaaataaatt
3001 ccaatactga tggaaaacag gaagagaaga gtgagaataa tatagttaaa
3051 agttgattta aattcaaaag ttcctgatta atttatgcat gttactttca
3101 ttcaaaattg cccagacttt gtgt