Sequence of DPV Rice grassy stunt virus
Rice grassy stunt virus segment RNA4 p4v and p4c genes, genomic RNA, isolate Longan
ACC No: FR696599
Dated: 2010-12-05 | Length: 2894 | CRC: 1048113592
ID FR696599; SV 1; linear; genomic RNA; STD; VRL; 2894 BP.
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AC FR696599;
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DT 05-DEC-2010 (Rel. 107, Created)
DT 05-DEC-2010 (Rel. 107, Last updated, Version 1)
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DE Rice grassy stunt virus segment RNA4 p4v and p4c genes, genomic RNA,
DE isolate Longan
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KW .
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OS Rice grassy stunt virus
OC Viruses; ssRNA negative-strand viruses; Tenuivirus.
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RN [1]
RP 1-2894
RA Hoang H.T.T.;
RT ;
RL Submitted (05-OCT-2010) to the EMBL/GenBank/DDBJ databases.
RL Hoang H.T.T., Plant Cell of Biotechnology, Institute of Biotechnology, 18
RL Hoang Quoc Viet, Cau Giay, Hanoi, 10000, VIET NAM.
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RN [2]
RA Hoang H.T.T., Hoang N.T., Nguyen N.T., Nguyen C.N., Le B.T., Chu H.H.;
RT "Genetic variation of Rice grassy stunt virus strains isolated in Vietnam";
RL Unpublished.
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FH Key Location/Qualifiers
FH
FT source 1. .2894
FT /organism="Rice grassy stunt virus"
FT /segment="RNA4"
FT /lab_host="Escherichia coli DH5-alpha"
FT /isolate="Longan"
FT /mol_type="genomic RNA"
FT /country="Viet Nam:Long An Province, Cuulong River Delta"
FT /isolation_source="rice leaf tissue lysate"
FT /db_xref="taxon:66266"
FT CDS 230. .727
FT /gene="p4v"
FT /product="hypothetical protein"
FT /protein_id="CBX26660.1"
FT /translation="MANLFFSTPQELRILNYIITRNTVQFHWTIPKNSDNPIIYATLLQ
FT NTKDFYFTELRSKDLNTEMLGLCIKLIIKVVIKINQGINIPLEDVFKKIYDDRGRNIYL
FT YTNFSDKDLERKVNQYVHCASLKLPIDFENHPLAPTHVLLWFTLIEYAQRTTRGAFQGV
FT LE"
FT CDS complement(1236. .2813)
FT /gene="p4c"
FT /product="hypothetical protein"
FT /protein_id="CBX26661.1"
FT /translation="MWNSQYVKTHNNNERESIQLKLNKAKKDKSVFHGIDLDYSLNDGM
FT GYQVVDVSRCLSPWFGIRVIQELCSMHKLHITRELETLDVNGGVNYMYEYYKNLELVPA
FT SKNCGIIGLFKMSEPFKLFGKNCSVVASRKNKQDNFRKYILWESMNDLIVLSAYRSDLK
FT EFRREALEAALDVLDERDYEYTPFTVPNYHLSDSGKVDPETKLETKSKMFQMRYEVSRS
FT KYGDGIRGEDMWILRGQAFAVLVDGDDQFRDPYVIRKNDEENTHDDEVSNDEGQTKLIV
FT YDRLQFTNRNLKLKVVVGNQFFLLVTISFVDLMNFEKKTMWSVCLHMAIRLIHAPVPRL
FT LDTMNDSMPPNTLPVANNINFPIILDLHIVAKSFISMGVDAIYDLNDATVSLILSVVDR
FT YTSEVFYLSSASSTTSDDFNVGFMDPGEWPQLDEDGSMSDFSEGIDLLGAEVQLYLLIR
FT ENLENVEEELRNIDATGQTNVPYKIRLVTRTFCGYIILKGDEVHRWILMMNDITSRPAL
FT QCKGFLTL"
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SQ Sequence 2894 BP; 930 A; 587 C; 427 G; 950 T; 0 other;
fr696599 Length: 2894 05-DEC-2010 Type: N Check: 5520 ..
1 acacaaagtc ctgggcacca tagaaagcga ataaccaacc tattgaacaa
51 aattgctttt taaatattga ttagattata aattccgtca actgctgatt
101 taagttcaaa ctcaaatctt ggtaaattct attttagtat tttaattaga
151 tccatatttc caaaataaat aaagagtgca aaaaaatctc ttaaatagtg
201 agaagctgcc actcaaggtg tttgccagta tggcaaactt attcttcagt
251 actccgcagg agctgaggat tttaaattat ataataacta ggaatactgt
301 acaatttcac tggacgattc ctaaaaattc tgataaccct attatttacg
351 caacactctt gcagaacact aaagatttct atttcacaga gttgagaagt
401 aaagatttaa acactgaaat gctgggctta tgcatcaagt taataattaa
451 agtagtgatc aagataaacc agggaatcaa tataccatta gaagatgtgt
501 tcaagaaaat ttatgatgat agaggtagaa acatttattt atatacaaat
551 tttagtgata aagacttaga aagaaaggtt aaccaatatg tacattgtgc
601 atctcttaaa ctacctatcg atttcgagaa ccacccatta gctcccacac
651 acgttcttct ctggttcact ctcatcgagt acgctcagag aaccactagg
701 ggtgctttcc aaggtgttct agaatgagaa accaagctct ggagttaaaa
751 ctattagtaa gattccaaaa tatcgactac ggtcgatatc ccaggtaatt
801 tgttggatga tggccgaagc catgtttttt tgttgattac cttcagaata
851 ctccatgctc agctctaaaa cttgctatat gcacccacaa gctttgttga
901 tcatgtattt aattttccta gccttaatct tattactatc tggtgactaa
951 aactctaata gtcatacata tttcagacta gtaacacatt catacttata
1001 gctaagtggt taacttactc agtatttatt taataggtgc ctgttaactg
1051 atttctgatt gggggggttg cttagtcaat atgtgaaact cttagttcag
1101 atggaacaag tgcatagggg gggcatttag cactgtccaa cttactttga
1151 gttcaacaat tgatctcaaa caatccttct ctcagaaaat agctacttca
1201 ctattcagta aatttatcta cttatagttg tttagttata atgttagaaa
1251 tcccttacat tgtagtgctg gtctagatgt gatgtcattc atcattagaa
1301 tccatctatg tacttcatcc cccttaagaa taatgtaacc acagaaggtt
1351 ctagtcacta gccttatttt gtatggcaca ttagtctgac ctgtcgcatc
1401 tatgttcctc agttcttcct caacattctc aagattctcc cttatcaaca
1451 agtacaattg aacttctgca cctaatagat caattccctc tgagaaatct
1501 gacatactcc catcctcatc aagctgtggc cattcccctg gatccatgaa
1551 tccaacattg aaatcgtcag aggttgttga ggaagctgat gacaagtaaa
1601 acacttcact agtgtaccta tcaacaacac taagaatcag acttacagta
1651 gcatcattta aatcatatat agcatcaacc cccatgctaa taaaagactt
1701 agcaactatg tgtaaatcca aaattatagg aaagttaata ttattggcta
1751 ctggcaaagt gtttggtggc atagaatcat tcatagtatc taacaatcta
1801 gggactggag catgaattag tctgatggcc atatgcaagc acactgacca
1851 cattgtcttc ttttcaaagt tcattagatc tacgaagctg atggtcacca
1901 agaggaagaa ttgattcccc accactactt tcaacttaag gtttctattt
1951 gtaaattgca atctgtcgta aacaatcaac ttagtttgac cttcatcatt
2001 actaacttca tcatcatgag tattttcttc atcattcttc cttattacat
2051 agggatctct aaactggtca tcgccatcaa cgaggactgc gaaagcttga
2101 cctctcaata tccacatgtc ttctcctcta attccatcac catatttgga
2151 tctagagact tcatacctca tttgaaacat cttagattta gtttctaact
2201 tagtttcagg atctacctta ccagaatcac ttaaatgata attagggaca
2251 gtgaatggag tgtattcata atctctctca tctaatacat ctagtgcagc
2301 ctctagagcc tctcttctaa attcttttaa atcacttcta taagcactta
2351 gaacaatcaa atcattcatc gattcccaca atatgtattt cctaaaattg
2401 tcctgtttat ttttcctact ggcaacaaca ctacaattct taccaaataa
2451 tttaaaaggc tcactcattt taaatagtcc aataatgcca caattcttgc
2501 tagctggcac taattccaaa ttcttataat actcatacat ataattaaca
2551 ccaccattaa catctaatgt ctccaattct ctagttatgt gcagtttatg
2601 catagaacat aattcctgga taacacgaat tccaaaccat ggtgataggc
2651 acctagagac atcaacaact tgataaccca taccatcatt tagtgaataa
2701 tctagatcaa tgccatgaaa cacagattta tctttcttgg ccttgtttaa
2751 cttaagttgg atgctctctc tctcattgtt gttgtgtgtc ttcacatatt
2801 gtgaattcca catatttaaa agattaaaag gaaacccaaa gtttatacta
2851 atgtagtttt tttctctttt tcaaattttg cccagacttt gtgt