Sequence of DPV Banana bunchy top virus

Banana bunchy top virus isolate TJ1 segment DNA-U3, complete sequence.

ACC No: GQ214699

Dated: 2011-08-25 | Length: 1062 | CRC: -2050089153

                
ID   GQ214699; SV 1; circular; genomic DNA; STD; VRL; 1062 BP.
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AC   GQ214699;
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DT   31-MAY-2011 (Rel. 109, Created)
DT   25-AUG-2011 (Rel. 109, Last updated, Version 2)
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DE   Banana bunchy top virus isolate TJ1 segment DNA-U3, complete sequence.
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KW   .
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OS   Banana bunchy top virus
OC   Viruses; ssDNA viruses; Nanoviridae; Babuvirus.
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RN   [1]
RP   1-1062
RX   PUBMED; 21539936.
RA   Hyder M.Z., Shah S.H., Hameed S., Naqvi S.M.;
RT   "Evidence of recombination in the Banana bunchy top virus genome";
RL   Infect. Genet. Evol. 11(6):1293-1300(2011).
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RN   [2]
RP   1-1062
RA   Hyder M.Z., Shah S.H., Naqvi S.M.S.;
RT   ;
RL   Submitted (26-MAY-2009) to the INSDC.
RL   Department of Biochemistry, PMAS Arid Agriculture University Rawalpindi,
RL   Murree Road, Rawalpindi 46300, Pakistan
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1062
FT                   /organism="Banana bunchy top virus"
FT                   /segment="DNA-U3"
FT                   /host="Musa acuminata Colla cv. Dwarf Cavendish (Basrai)"
FT                   /isolate="TJ1"
FT                   /mol_type="genomic DNA"
FT                   /country="Pakistan:Tandojam, Sindh"
FT                   /collection_date="2005"
FT                   /db_xref="taxon:12585"
FT   CDS             144. .377
FT                   /codon_start=1
FT                   /product="U3"
FT                   /protein_id="ADD91484.1"
FT                   /translation="MTEGQGNRSTLFWLAQQDTRIKLLIRRTRGRTEILLHLYKYPSPV
FT                   KDNCSLSSVKVVVLRRKIASGDRRNDLHLERR"
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SQ   Sequence 1062 BP; 351 A; 180 C; 243 G; 288 T; 0 other;

gq214699 Length: 1062  25-AUG-2011  Type: N  Check: 5997  ..

       1  agcacggggg actattatta ccccccgtgc tcgggacggg acatgggctt
      51  tttaaatggg ccttgagagt ttgaacagtt cagtatcttc gttattgggc
     101  caacccggcc caataattaa gagaacgtgt tcaaattcgt ggtatgaccg
     151  aaggtcaagg taaccggtca acattattct ggcttgcgca gcaagataca
     201  cgaattaaat tattaattcg taggacacgt ggacggaccg aaatactcct
     251  gcatctctat aaatacccta gtcctgtgaa ggataattgc tctctctctt
     301  ctgtgaaggt ggttgtgctg aggcggaaga tcgccagcgg cgatcgtcgg
     351  aacgacctgc atctagagag gcggtgaagc aaactacgaa gcgtatatcc
     401  ggtatttata gacttatagc gcagctagaa gtatacactg tacagatatt
     451  gtattttgta aataacgaag aatttcgtat ttgatattaa taaaacacct
     501  gggtgtgtta atgtttacat taaatagtat cttgtaggta caaaataaaa
     551  tacagtatac ggaacgtata ctgacaaagt aataaatgat aggcgaagca
     601  tgtttaacag gtgtttaggt ataattaaca taattatgag aagtaataat
     651  aatacggaaa atgaataagt atgaggtgaa agaggagata ttagaatatt
     701  taaaaaccca attatattat tttggaacga aatacaacac gctatgaaat
     751  acaagacgct atgacaaatg tacgggtatc tgattgtgta tcttaacgct
     801  taagggccgc aggcccgtca agttgaatga acggtccaga ttaattcctt
     851  agcgactaag aaaggaatct taaagtggac cacataaaag acagctgtca
     901  ttgattaaat aaataatata atattcaaaa gacctttgta cccctgataa
     951  tgatgacgtg taggggtgtc ccgttgtaat atagcatagc tatgagaaga
    1001  gataagcatc tggccgacaa ctttagtggt gggccagatg tcccgagtta
    1051  gtgcgccacg ta