Sequence of DPV Tomato leaf curl Hainan virus
Tomato leaf curl Vietnam virus isolate Hung Yen segment DNA A, complete sequence.
ACC No: GQ338766
Dated: 2009-07-29 | Length: 2743 | CRC: -1513171453
ID GQ338766; SV 1; circular; genomic DNA; STD; VRL; 2743 BP.
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AC GQ338766;
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DT 29-JUL-2009 (Rel. 101, Created)
DT 29-JUL-2009 (Rel. 101, Last updated, Version 1)
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DE Tomato leaf curl Vietnam virus isolate Hung Yen segment DNA A, complete
DE sequence.
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KW .
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OS Tomato leaf curl Vietnam virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2743
RA Thanh T.N., Vinh D.N., Mukheerjee S.M.;
RT ;
RL Submitted (29-JUN-2009) to the EMBL/GenBank/DDBJ databases.
RL Plant Molecular Biology, International Centre For Genetic Engineering and
RL Biotechnology, Aruna Asaf Ali Marg, New Delhi, Delhi 110067, India
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FH Key Location/Qualifiers
FH
FT source 1. .2743
FT /organism="Tomato leaf curl Vietnam virus"
FT /segment="DNA A"
FT /host="tomato"
FT /isolate="Hung Yen"
FT /mol_type="genomic DNA"
FT /country="Viet Nam:Khoai Chau, Hung Yen"
FT /collection_date="12-Jan-2008"
FT /db_xref="taxon:208177"
FT gene 132. .482
FT /gene="AV2"
FT CDS 132. .482
FT /codon_start=1
FT /gene="AV2"
FT /product="pre-coat protein"
FT /protein_id="ACT79065.1"
FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLLRDL
FT ISVIRAKDYVEASRRYSHFHSRIQGASPAEFRQPVCQPCCCPHCPRHKQKEVMGESAHV
FT PKAQDVQNVQKP"
FT gene 292. .1065
FT /gene="AV1"
FT CDS 292. .1065
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /protein_id="ACT79066.1"
FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYASRAAAPTVLVTNKRRSW
FT VNRPMYRKPRMYRMYKSPDVPRGCEGPCKVQSYEQRHDVVHVGKVICVSDVTRGNGLTH
FT RVGKRFCVKSVYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPFGTPQDFGQVFNMYDNE
FT PSTATVKNDNRDRFQVLRRFQATVTGGQYASKEQAIVRKFMKVNIHVTYNHQEAAKYDN
FT PPENALLLYMACTHASHLVYATLKIRIYFYDSVQN"
FT gene complement(1062. .1466)
FT /gene="AC3"
FT CDS complement(1062. .1466)
FT /codon_start=1
FT /gene="AC3"
FT /product="replication enhancer protein"
FT /protein_id="ACT79067.1"
FT /translation="MDSRTGEAITATQAESGVYIWTVKNPLYFKIISHDERPFLMNNDI
FT ITIQVQFNYNLRKALGIHQCFLIFQIWTRLRPQTWRFLRVFRVQCMKYLDNLGVISINN
FT VIRACDHVLWDVLEKTEFVTLPNIIKFILY"
FT gene complement(1207. .1611)
FT /gene="AC2"
FT CDS complement(1207. .1611)
FT /codon_start=1
FT /gene="AC2"
FT /product="transcription activator protein"
FT /note="suppressor"
FT /protein_id="ACT79068.1"
FT /translation="MRSSSPSKAHSTQVPIKVQHRNAKKATRRRRVDLPCGCSYFIALG
FT CHNHGFSHRGSYHCNSSREWRIYLDGQKSPIFQDNQPRRETISDEQRHHHNTSPIQLQP
FT EESVGNTPMFSNLPDLDSFTSSDLAFLKSI"
FT gene complement(1514. .2599)
FT /gene="AC1"
FT CDS complement(1514. .2599)
FT /codon_start=1
FT /gene="AC1"
FT /product="Rep protein"
FT /protein_id="ACT79069.1"
FT /translation="MAPPNKFRINAKNYFLTYPHCSLTKEEALSQLKNLETPVNKLFIR
FT ICREFHEDGTPHLHVLIQFEGKFQCKNQRFFDLISPSRSAHFHPNIQAAKSSTDVKSYM
FT DKDGDVLDHGLFQIDGRSARGGCQSANDAYAEAINSGSKASALNILREKAPKDYVLQFH
FT NLNNNLDRIFTPPMEVYVSPFSSSSFDRVPEELEEWAAENVVSAAARPLRPISIVIEGD
FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDW
FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEDKNSALKIWAIKNAIFVTLQGAL
FT YSGSYQSATPQRQESNEETES"
FT gene complement(2149. .2442)
FT /gene="AC4"
FT CDS complement(2149. .2442)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /protein_id="ACT79070.1"
FT /translation="MELLTCMFSSNSKGNSNVKTKDSSISYPQAGQHISIRTFRQLKAQ
FT QMSSPIWTKTETCLIMDFSRSMEDRLEEVANLPTTHMPRQSIQGPKLRPSIY"
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SQ Sequence 2743 BP; 742 A; 542 C; 608 G; 851 T; 0 other;
gq338766 Length: 2743 29-JUL-2009 Type: N Check: 8681 ..
1 accggatggc cgcgattttt tttacatggt ccccaccact aacaaatgtc
51 ctccacttag aacgctccct caaagcctat ttaattcaaa tccattatat
101 atacttggtc cccaagtact cactttaaaa tatgtgggat cctttactga
151 atgagtttcc cgaaaccgta cacggtttta ggtgtatgtt agcgattaaa
201 tatttgcaat tagtagaaaa tacatactct cctgatacat tagggtacga
251 tttgcttcgt gatttaattt cagttattcg tgctaaggac tatgtcgaag
301 cgtcccgcag atatagtcat ttccactccc gcatccaagg tgcgtcgccg
351 gctgaatttc gacagcccgt atgccagccg tgctgctgcc cccactgtcc
401 tcgtcacaaa caaaaggagg tcatgggtga atcggcccat gtaccgaaag
451 cccaggatgt acagaatgta caaaagccct gatgttcctc gaggatgtga
501 aggcccatgt aaggttcagt cctatgaaca gcgtcatgat gtagtgcacg
551 taggtaaagt catttgtgtg tcggatgtta ctcgtggtaa cgggttgact
601 catcgagtgg gaaagaggtt ttgtgttaag tctgtttatg ttttgggcaa
651 gatatggatg gatgagaaca ttaagaccaa gaatcatact aatactgtga
701 tgtttttttt agtgcgtgat aggagaccat ttgggactcc acaggatttt
751 ggtcaggtgt ttaacatgta tgataacgag ccaagtacag ccacggtgaa
801 gaacgacaac agagatcgct ttcaagttct acggcgtttt caggctactg
851 ttactggtgg tcagtatgca agtaaggagc aagcaatagt taggaagttt
901 atgaaggtga acatccatgt gacgtataat catcaagaag ctgcgaagta
951 tgacaatcca ccagagaatg ctcttttgtt gtatatggca tgtacccatg
1001 ctagtcatct ggtgtatgct acattgaaaa tcagaatcta tttctatgat
1051 tctgttcaga attaataaag gatgaatttt attatatttg gaagtgttac
1101 aaattctgtt ttttccaata catcccataa tacatgatca catgctctaa
1151 ttacattgtt aatactaatt acacccaaat tatctaaata tttcatacat
1201 tgaaccctaa atactcttaa gaaacgccaa gtctgaggac gtaaacgagt
1251 ccagatctgg aagattagaa aacattggtg tattcccaac gctttcctca
1301 ggttgtaatt gaattggact tgtattgtga tgatgtcgtt gttcatcaga
1351 aatggtctct cgtcgtggct gattatcttg aaatataggg gatttttgac
1401 cgtccagata tatacgccac tctctgcttg agttgcagtg atagcttccc
1451 ctgtgcgaga atccatgatt gtgacagcct agtgcaatga agtatgaaca
1501 gccacaaggg agatcaactc tccgtctcct cgttgctttc ttggcgttgc
1551 ggtgttgcac tttgatagga acctgagtag agtgcgcctt ggagggtgac
1601 gaagatcgca ttttttattg cccagatttt aagtgcgctg ttcttatctt
1651 cgtccaagaa ttctttatag cttgaattgg ggccgggatt gcagaggaag
1701 atagtgggaa ttcccccttt aatttgaacg ggttttccgt actttgtgtt
1751 gctttgccag tccctttggg cccccatgaa ttctttaaaa tgctttaggt
1801 agtgcggatc gacgtcatca atgacgttgt accaggcatc attattgtat
1851 accttcggac ttaaatcaag atgaccacac aaataattat gtggtcctaa
1901 tgacctagcc cacatcgtct ttcccgtccg actatcgcct tcgataacta
1951 tacttatcgg tcttaaaggc cgcgcagcgg cactgacaac gttctctgca
2001 gcccactctt cgagttcctc tggaactcga tcaaaggaag aagaagaaaa
2051 aggcgaaaca taaacctcca ttggaggagt aaaaatccta tctaaattat
2101 tatttaaatt atgaaactgt aaaacataat ctttaggtgc cttttccctt
2151 agtatattga gggccgaagc tttggaccct gaattgattg cctcggcata
2201 tgcgtcgttg gcagattggc aacctcctct agccgatctt ccatcgatct
2251 ggaaaagtcc atgatcaagc acgtctccgt ctttgtccat ataggacttg
2301 acatctgttg agcttttagc tgcctgaatg ttcggatgga aatgtgctga
2351 cctgcttggg gatatgagat cgaagaatct ttggttttta cattggaatt
2401 tcccttcgaa ttggatgaga acatgcaggt gaggagttcc atcttcgtgg
2451 aattctctgc agatgcggat aaatagttta tttactgggg tttctaggtt
2501 tttaagttgg gaaagtgctt cttctttagt gagagagcag tgtggatatg
2551 tgaggaaata atttttggca tttattctga atttattagg aggagccatt
2601 gactggtcaa tcggtgtctc ataaacttgg ctatgcaatt ggtgtctggt
2651 gtcttattta tatgtggaca ccaaatggca ttatcgtaat tcccaaaaga
2701 aattcaaaat tcaaattggt aaagcggcca tccgtataat att