Sequence of DPV Wissadula golden mosaic St Thomas virus
Wissadula golden mosaic St Thomas Virus segment DNA-A, complete sequence.
ACC No: GQ355488
Dated: 2009-09-23 | Length: 2621 | CRC: -2029714402
ID GQ355488; SV 1; circular; genomic DNA; STD; VRL; 2621 BP.
XX
AC GQ355488;
XX
DT 23-SEP-2009 (Rel. 102, Created)
DT 23-SEP-2009 (Rel. 102, Last updated, Version 1)
XX
DE Wissadula golden mosaic St Thomas Virus segment DNA-A, complete sequence.
XX
KW .
XX
OS Wissadula golden mosaic St Thomas Virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus; Wissadula golden mosaic virus.
XX
RN [1]
RP 1-2621
RA Collins A.M., Roye M.E.;
RT "Wissadula amplissima is a host of multiple Geminiviruses in Jamaica";
RL Unpublished.
XX
RN [2]
RP 1-2621
RA Collins A.M., Roye M.E.;
RT ;
RL Submitted (05-JUL-2009) to the EMBL/GenBank/DDBJ databases.
RL University of the West Indies, Mona Campus, 2 St Johns Close, Kingston,
RL Jamaica
XX
FH Key Location/Qualifiers
FH
FT source 1. .2621
FT /organism="Wissadula golden mosaic St Thomas Virus"
FT /segment="DNA-A"
FT /host="Wissadula amplissima"
FT /mol_type="genomic DNA"
FT /country="Jamaica:Albion"
FT /db_xref="taxon:373593"
FT CDS 183. .938
FT /codon_start=1
FT /product="coat protein"
FT /protein_id="ACV85726.1"
FT /translation="MSKRDGSWRSIAGTAKVRRILNFSPRGGGGLKPTRAQEWVNRPMY
FT RKPKIYRTLRTPDIPRGCEGPCKVQSYEQRQDISHVGKVMCISDVTRGNGITHRVGKRF
FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV
FT KNDLRDRYQVMRRFYGKVTGGQYASNEQAIVRRFWKVNNHVVYNHQEAGKYENHTENAL
FT LLYMACTHAFNPVYATLKIRIYFYDSVMN"
FT CDS complement(935. .1333)
FT /codon_start=1
FT /product="replication enhancer protein"
FT /protein_id="ACV85725.1"
FT /translation="MDSRTGELITAPQAGNGVYIWEIENPLYFKIYRVEDPLYTRTRVY
FT HIQIRFNHNLRRALHLHKAYLNFQVWTTSMTASGSTYLLRFMHLVNMYLDQLGVISINN
FT VIRAVRFATARSYVSHVLENHSINFKIY"
FT CDS complement(1080. .1499)
FT /codon_start=1
FT /product="transcriptional activator protein"
FT /protein_id="ACV85724.1"
FT /translation="MHPSGTGLSRMRSSSPSQPPSIKKAHRQAKRRAIRRRRIDIECGC
FT SIYFHIGCTGHGFTHRGTHHCTSGGEWRVYLGDRKSPVFQDIQSRGPAIHQNKGIPHPD
FT TVQPQPEESVASPQSIPELPSLDDIDDSFWVNLFT"
FT CDS complement(1381. .2466)
FT /codon_start=1
FT /product="replication initiator protein"
FT /protein_id="ACV85722.1"
FT /translation="MPSAKRFKVSAKNYFITYPQCSLTKEEALSQLQQLTTPVNKKFIK
FT ICRELHENGEPHLHVLIQFEGKYQCTNYRFFDLVSSTRSAHFHPNIQGAKSSSDVKSYI
FT DKDGDTLEWGEFQIDGRSARGGQQSVNDTYAKALNAGSAEAALQIIKEEQPQHFFLQHH
FT NLTNNATKIFAKAPEPWAPPFPLSSFTNVPDEMIEWADEYFGRGSAARPQRPVSLIVEG
FT DSRTGKTMWARALGPHNYLSGHLDFNSRVFSNEMEYNVIDDVAPHYLKLKHWKELLGAQ
FT KDWQSNCKYGKPVQIKGGIPAIVLCNPGEGASYKEFLDKEENASLRNWTLKNAIFITLT
FT APLYQEGTQAGQEEGHQEETH"
FT CDS complement(2052. .2315)
FT /codon_start=1
FT /product="AC4 protein"
FT /protein_id="ACV85723.1"
FT /translation="MKMGSLISTSSSSSRASTSARITDSSIWFPQPGQHISIQTFRELN
FT PAPTSSPTSTRTEIHWNGESSRSTADLLEEASNLLTIHMPRR"
XX
SQ Sequence 2621 BP; 620 A; 599 C; 653 G; 749 T; 0 other;
gq355488 Length: 2621 23-SEP-2009 Type: N Check: 8923 ..
1 accggatggc cgcgtgcccc ccccttttgc cgtactatca cgcgcgctcc
51 ccttttcctc actcgcgctc tcgtccaatc atattgcgtc tgccgcgcct
101 aattattttg aacaacttgg gccctaagtt gttgaatggt ctataaatga
151 aaagctgatt ggcccacgta ctttaactca aaatgtctaa gcgcgatggc
201 tcctggcgct cgatcgcggg aaccgccaag gttaggcgca ttttgaattt
251 ctcccctcgt ggaggtggtg gtttaaaacc gaccagggcc caggaatggg
301 ttaacaggcc tatgtacagg aagcccaaga tataccggac gctgagaacc
351 cccgacatcc caagaggatg tgaaggccca tgcaaggtgc agtcctatga
401 acagcgccag gatatctctc acgtgggtaa ggtcatgtgt atatccgatg
451 tcacacgtgg taacggcatt acccaccgtg tgggtaagcg tttttgtgtt
501 aagtctgtgt atattttagg taagatatgg atggacgaga acatcaagct
551 gaagaaccat acgaacagtg ttatgttctg gttggtcagg gaccgtcgac
601 cgtatggcac gcctatggat ttcggccagg tgttcaacat gttcgacaac
651 gagcccagca ctgccacggt taagaacgat ctccgggatc gttaccaggt
701 tatgcgccga ttctatggga aggtgacagg tggacagtat gccagcaacg
751 agcaggctat tgtcaggcgg ttctggaagg tcaataacca tgtggtctac
801 aaccaccagg aggctggcaa atacgagaac cacacggaga acgctctgtt
851 attgtatatg gcatgtacac atgcctttaa tcctgtgtat gcaactctga
901 agattcgaat ctatttttat gattcggtca tgaattaata aattttaaaa
951 tttattgaat gattctccag tacatgactc acatacgatc tggctgttgc
1001 aaaacgaaca gctctaatta cattgttaat ggaaataacg cctaactgat
1051 ctaagtacat gttgactaag tgcataaacc taagtaaata agttgaccca
1101 gaagctgtca tcgatgtcgt ccagacttgg aagttcaggt atgctttgtg
1151 gagatgcaac gctctcctca ggttgtggtt gaaccgtatc tggatgtggt
1201 atacccttgt tctggtgtat agcgggtcct ctactctgta tatcttgaaa
1251 tacaggggat tttcgatctc ccagatatac acgccattcc ccgcctgagg
1301 tgcagtgatg agttccccgg tgcgtgaatc catgtcccgt gcagcctatg
1351 tggaagtaga tggagcaccc gcactctata tcaatgcgtc tcctcctgat
1401 ggccctcctc ttggcctgcc tgtgtgcctt cttgatagag gggggctgtg
1451 agggtgatga agatcgcatt cttgagagtc cagttcctga gggatgcatt
1501 ttcctccttg tccaggaact ctttatagct ggcaccctca ccaggattgc
1551 atagcacgat tgctgggatc cctcctttaa tttgaactgg cttgccgtat
1601 ttgcaattgg actgccagtc tttttgggcc cccagcaact ctttccagtg
1651 ctttagtttt agatagtgcg gtgcgacgtc atcaatgacg ttatactcca
1701 tttcgtttga gaagacccgg gaattgaagt ctaagtgtcc actcaggtag
1751 ttatgtgggc ctaacgctcg agcccacatt gtcttccctg tcctcgaatc
1801 accttcgact atgagactta ctggtctctg tggccgcgca gcggaacctc
1851 ttccaaaata ttcatctgcc cattcaatca tctcgtccgg aacgttagtg
1901 aaagaggaga gtggaaacgg aggagcccaa ggttccggag cctttgcgaa
1951 tattttggta gcgttattag tcaggttgtg atgttgaagg aagaaatgtt
2001 gtggttgttc ttcctttatt atttgcagag cagcctctgc tgagcctgca
2051 tttaacgcct tggcatatgt atcgttaaca gattgctggc ctcctctagc
2101 agatctgccg tcgatctgga actctcccca ttccagtgta tctccgtcct
2151 tgtcgatgta ggacttgacg tcggagctgg atttagctcc ctgaatgttt
2201 ggatggaaat gtgctgaccg ggttgaggaa accagatcga agaatctgta
2251 attcgtgcac tggtacttgc cctcgaactg gatgaggacg tggagatgag
2301 gctccccatt ttcatgaagt tctctgcaga tcttgatgaa cttcttgtta
2351 actggagttg ttagttgttg taattgggaa agtgcctcct ctttggtaag
2401 agagcattgg ggatatgtga tgaaataatt tttggctgag actttaaaac
2451 gtttagctga tggcattttt gtaaaaaaga ggtgtacccc agatgagtta
2501 ccccgattga tctctccaac ttctgtgcta tgtattgggg tatggggtat
2551 tatatatact agaaccctca ataggacttt ggatctcgtt cacacacgtg
2601 gcggccatcc gatataatat t