Sequence of DPV Soybean mosaic virus

Soybean mosaic virus strain C2 P3 protein gene, partial cds.

ACC No: GQ491064

Dated: 2011-09-04 | Length: 1041 | CRC: 1622403660

                
ID   GQ491064; SV 1; linear; genomic RNA; STD; VRL; 1041 BP.
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AC   GQ491064;
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DT   31-AUG-2011 (Rel. 109, Created)
DT   04-SEP-2011 (Rel. 110, Last updated, Version 2)
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DE   Soybean mosaic virus strain C2 P3 protein gene, partial cds.
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KW   .
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OS   Soybean mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-1041
RA   Yang Q.H., Gai J.Y.;
RT   "Homological Analysis of P3 Gene between Soybean Mosaic Virus Strains in
RT   China and Sixteen Potyviruses";
RL   Unpublished.
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RN   [2]
RP   1-1041
RA   Yang Q.H., Gai J.Y.;
RT   ;
RL   Submitted (16-AUG-2009) to the INSDC.
RL   National Center for Soybean Improvement, Nanjing Agricultural University,
RL   Weigang No.1, Nanjing, Jiangsu 210095, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1041
FT                   /organism="Soybean mosaic virus"
FT                   /host="soybean"
FT                   /strain="C2"
FT                   /serotype="positive"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Chongqing"
FT                   /collection_date="Aug-2004"
FT                   /PCR_primers="fwd_seq: ctaatgaccttcagagcgagat, rev_seq:
FT                   accgcatcactcctttca"
FT                   /db_xref="taxon:12222"
FT   CDS             <1. .>1041
FT                   /codon_start=1
FT                   /product="P3 protein"
FT                   /protein_id="ADM43425.1"
FT                   /translation="GEVQQRMKCETALITSIFKPKRMVQILENDPYILLMGLVSPSILI
FT                   HMYRMKHFEKGVELWISKEHSVAKIFIILEQLTKRVAANDVLLEQLEMISETSERFMSI
FT                   LEDCPQAPHSYKTAKDLLTMYIERKASNNQLVENGFVDMNDKLYMAYEKIYSDRLKQEW
FT                   RALSWLEKFSITWQLKRFAPHTEKCLTKKVVEESSASSGNFASVCFMNAQSHLRNVRNT
FT                   LFQKCDQVWTASVRAFVRFIISTLHRCYSDIVHLVNICIIFSLLVQMTSVLQGIVNTAR
FT                   RDKALLNGWKRKEDEEAVIHLYEMCEKMEGGHPSIEKFLDHVKGVRPDLLPVAVSMTGQ
FT                   SEDVSAQ"
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SQ   Sequence 1041 BP; 352 A; 173 C; 239 G; 277 T; 0 other;

gq491064 Length: 1041  04-SEP-2011  Type: N  Check: 5190  ..

       1  ggtgaagtgc aacagagaat gaagtgtgaa acagcactta taacaagcat
      51  tttcaaacct aagagaatgg ttcaaatcct tgaaaatgac ccatacattc
     101  tcttgatggg cttagtttca ccttctatct tgattcacat gtatcgtatg
     151  aagcattttg agaaaggggt ggagctgtgg ataagtaaag aacatagtgt
     201  ggcaaagatt ttcatcatat tggaacaact cactaagagg gtcgctgcaa
     251  atgatgtgct acttgagcaa cttgaaatga tttcagaaac ttctgagagg
     301  ttcatgagta tcttagagga ttgccctcaa gcaccacatt catacaagac
     351  agcaaaagat ttgttgacaa tgtacataga aagaaaagca tccaacaacc
     401  aattggtgga gaatggtttt gtagatatga atgacaaatt gtatatggca
     451  tatgaaaaaa tctactcaga tcgcttgaag caggaatggc gcgcattaag
     501  ctggttggaa aaattttcta taacatggca attgaaaagg tttgctccac
     551  atacggagaa atgtttgaca aagaaagttg tagaagaaag cagcgcatct
     601  tcaggaaact ttgcgagtgt gtgcttcatg aatgcccagt cacacctaag
     651  aaatgtaaga aatacacttt tccaaaaatg tgaccaggtt tggactgcat
     701  cggtgcgagc ctttgtgaga tttataattt caacacttca taggtgctac
     751  agtgatatag ttcatctggt gaacatctgc ataatctttt cattgcttgt
     801  ccaaatgact agtgtactgc agggcattgt taacacagca aggagagaca
     851  aagcactctt aaatggatgg aaaagaaaag aagatgaaga ggccgtgatt
     901  catttgtatg aaatgtgtga aaagatggaa ggtggacacc caagtattga
     951  gaaatttttg gaccatgtca agggagttag acctgatcta ctccctgtag
    1001  cagtgagcat gacaggacaa tcagaggatg tctccgcaca g