Sequence of DPV Soybean mosaic virus

Soybean mosaic virus strain C11 P3 protein gene, partial cds.

ACC No: GQ491073

Dated: 2011-09-04 | Length: 1041 | CRC: 1918160057

                
ID   GQ491073; SV 1; linear; genomic RNA; STD; VRL; 1041 BP.
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AC   GQ491073;
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DT   31-AUG-2011 (Rel. 109, Created)
DT   04-SEP-2011 (Rel. 110, Last updated, Version 2)
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DE   Soybean mosaic virus strain C11 P3 protein gene, partial cds.
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KW   .
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OS   Soybean mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-1041
RA   Yang Q.H., Gai J.Y.;
RT   "Homological Analysis of P3 Gene between Soybean Mosaic Virus Strains in
RT   China and Sixteen Potyviruses";
RL   Unpublished.
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RN   [2]
RP   1-1041
RA   Yang Q.H., Gai J.Y.;
RT   ;
RL   Submitted (17-AUG-2009) to the INSDC.
RL   National Center for Soybean Improvement, Nanjing Agricultural University,
RL   Weigang No.1, Nanjing, Jiangsu 210095, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1041
FT                   /organism="Soybean mosaic virus"
FT                   /host="soybean"
FT                   /strain="C11"
FT                   /serotype="positive"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Shanghai"
FT                   /collection_date="May-2004"
FT                   /PCR_primers="fwd_seq: ctaatgaccttcagagcgagat, rev_seq:
FT                   accgcatcactcctttca"
FT                   /db_xref="taxon:12222"
FT   CDS             <1. .>1041
FT                   /codon_start=1
FT                   /product="P3 protein"
FT                   /protein_id="ADM43434.1"
FT                   /translation="GEVQQRMKCETALITSIFKPKRMVQILENDPYILLMGLVSPSILI
FT                   HMYRMKHFEKGVELWISKEHSVAKIFIILEQLTKRVAANDVLLEQLEMISETSERFMSI
FT                   LEDCPQAPHSYKTAKDLLTMYIERKASNSQLVENGFVDMNDKLYMAYEKIYSDRLKQEW
FT                   RALSWLEKFSTTWQLKRFAPHTEKCLTKKVVEESSASSGNFASVCFMNAQSHLRNVRNT
FT                   LFQKCDQVWTASVRAFVRFIISTLHRCYSDIVYLVNICIIFSLLVQMTSVLQNIVNTAR
FT                   RDKALLNGWKRKEDEEAVIHLYEMCEKMEGGHPSIEKFLDHVKGVRPDLLPIAVSMTGQ
FT                   SEDVSAQ"
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SQ   Sequence 1041 BP; 349 A; 175 C; 242 G; 275 T; 0 other;

gq491073 Length: 1041  04-SEP-2011  Type: N  Check: 5115  ..

       1  ggtgaagtgc aacagagaat gaagtgtgaa acagcactta taacaagcat
      51  tttcaaacct aagagaatgg ttcaaatcct tgaaaatgac ccatacattc
     101  tcttgatggg cttggtttca ccttctatct tgattcacat gtatcgtatg
     151  aagcattttg agaaaggggt ggagttgtgg ataagtaaag aacatagtgt
     201  ggcaaagatt ttcatcatat tggaacaact cactaagagg gtcgctgcaa
     251  atgatgtgct acttgagcaa cttgaaatga tttcagaaac ttctgagagg
     301  ttcatgagta tcttagagga ttgccctcaa gcaccacatt catacaagac
     351  ggcaaaagat ttgttgacaa tgtacataga aaggaaagca tccaatagcc
     401  aattggtgga gaatggtttt gtagatatga atgacaaatt gtacatggca
     451  tatgaaaaaa tctactcaga tcgcttgaag caggaatggc gcgcattaag
     501  ctggttggaa aaattttcta caacatggca attgaaaaga tttgctccac
     551  atacggagaa atgtttgaca aagaaagttg tagaagaaag cagcgcatct
     601  tcaggaaact ttgcgagtgt gtgcttcatg aatgcccagt cacacctaag
     651  aaatgtaaga aatacacttt ttcaaaaatg tgaccaggtt tggacagcat
     701  cggtgcgagc ctttgtgagg ttcataattt caacacttca cagatgctac
     751  agtgatatag tttatctggt gaacatctgt ataatctttt cattgctcgt
     801  ccaaatgact agtgtgcttc agaacattgt caacacagca aggagagaca
     851  aagcactctt gaatggatgg aaaaggaaag aagatgagga ggccgtgatt
     901  catttgtatg aaatgtgtga aaagatggaa ggtggacatc cgagtattga
     951  gaaatttttg gaccatgtca agggagtcag acccgatcta ctccctatag
    1001  cagtgagcat gacaggacaa tcagaggatg tctccgcaca a