Sequence of DPV Quaranfil virus
Quaranfil virus isolate EG T 377 polymerase PB2 (PB2) gene, complete cds.
ACC No: GQ499302
Dated: 2009-11-09 | Length: 2421 | CRC: -1341377292
ID GQ499302; SV 1; linear; genomic RNA; STD; VRL; 2421 BP.
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AC GQ499302;
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DT 09-NOV-2009 (Rel. 102, Created)
DT 09-NOV-2009 (Rel. 102, Last updated, Version 1)
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DE Quaranfil virus isolate EG T 377 polymerase PB2 (PB2) gene, complete cds.
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KW .
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OS Quaranfil virus
OC Viruses; ssRNA negative-strand viruses; Orthomyxoviridae;
OC unclassified Orthomyxoviridae.
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RN [1]
RP 1-2421
RX DOI; 10.1128/JVI.00677-09.
RX PUBMED; 19726499.
RA Presti R.M., Zhao G., Beatty W.L., Mihindukulasuriya K.A., da Rosa A.P.,
RA Popov V.L., Tesh R.B., Virgin H.W., Wang D.;
RT "Quaranfil, Johnston Atoll, and Lake Chad viruses are novel members of the
RT family Orthomyxoviridae";
RL J. Virol. 83(22):11599-11606(2009).
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RN [2]
RP 1-2421
RA Presti R.M., Wang D., Virgin H.W.;
RT ;
RL Submitted (19-AUG-2009) to the INSDC.
RL Medicine, Washington University, 660 S. Euclid, St. Louis, MO 63110, USA
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FH Key Location/Qualifiers
FH
FT source 1. .2421
FT /organism="Quaranfil virus"
FT /segment="1"
FT /host="Argas reflexus"
FT /isolate="EG T 377"
FT /mol_type="genomic RNA"
FT /country="Afghanistan"
FT /collection_date="Sep-1968"
FT /db_xref="taxon:688436"
FT gene complement(190. .2391)
FT /gene="PB2"
FT CDS complement(190. .2391)
FT /codon_start=1
FT /gene="PB2"
FT /product="polymerase PB2"
FT /db_xref="GOA:D0UFC7"
FT /db_xref="InterPro:IPR001591"
FT /db_xref="UniProtKB/TrEMBL:D0UFC7"
FT /protein_id="ACY56278.1"
FT /translation="MAATPESLQARKTRLLSVVRKIKSVALDPLADQVFGLLRSNPVCN
FT KRVLTKYARVVKDPDPIATTQLLMGQKYPILAKEKYLHHFTPEERAANFAEEEDCRRPG
FT WKRCTRKALNLWLDKEIEPNEETKQVIKVLYENSFDLVRDYLSHSWDRAIIRYGIVPKE
FT RQVVATRKVLVDVPKEYRQKAVVEIIQPGFNLNQPEVKIYVEKIMEKIGHKMVLGMSIV
FT DQARVLLNSLDPKMRMLPVAVTLHDNLAQHSISYYGNNWMVHHLPGRVYDTPGDTNDLR
FT EACSLIMREVLKVKPEKRRDHLLHLRKGPQGLLEVLQETKENYPVKVIKSLLGLPCSKS
FT HDYFGTQMIIEAAVEESRLVTSGGGVSWREYTGIERIHFRHDDVRGWYTHDGPLIKEIV
FT FSRTERKTFTKLLVNIANYIHYDWAARPAKTAKEMRRLTMEEVMLSPWSFLGATRGIWQ
FT EFWARLDSSYFPTSEEIRNYLQMGDGEIKIRCVLETEVPGDTSVYYRVTDEGALVEVGG
FT SSRIPKIESLPKRSSKTLDGTWNSNDMTFIPILHPTVCLPRTIEFHYSRPDLLSDIQCF
FT NFSNYNQHCPYLLPANERASFCNTARMMLYGASTQVRRWPKVYLAYLYCFAGFHETPTV
FT SKLHRTRFLTYDEIDLYAQRGVFKHNPENDTWLIFNKEWVGLNDPFQFPGLLVSSALLG
FT YRLENVTHAGKRKREDDLMDLKDGMKELESKMDGSSVYV"
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SQ Sequence 2421 BP; 518 A; 636 C; 542 G; 725 T; 0 other;
gq499302 Length: 2421 09-NOV-2009 Type: N Check: 9854 ..
1 agcaatcaca atcctctttt tctttaaacc actactgttc tatttccgct
51 tgacaatctt gcggggtgca ctccaaatca tgtctctagt gcgatcttca
101 ttgatccttt ccatcccccg cttcagggca attctcttct tttcacctgc
151 agtgcgatcc cgtaccagaa gttgaatccc ctgggccact cagacataaa
201 cacttgaccc gtccattttg ctttccagct ccttcatccc gtctttcaag
251 tccatgagat catcctcgcg ctttctcttc cctgcgtggg tcacattttc
301 aagtcggtaa cccaagagtg cgctgctcac caagaggcca gggaactgga
351 atgggtcatt cagtcctacc cactccttgt tgaagatcaa ccatgtgtcg
401 ttctcggggt tgtgtttgaa cacgcctctc tgggcataca agtctatctc
451 atcgtaagtg aggaaccttg tcctgtgtag tttggagaca gtgggtgttt
501 cgtggaaccc ggcaaaacag tacaagtacg ccaagtacac tttgggccac
551 ctacgcacct gggtggatgc accatatagc atcattcggg cagtattgca
601 aaacgaggct ctctcattgg ctgggaggag ataggggcag tgctggttgt
651 agttgctgaa attgaagcac tgtatgtcag acagaaggtc gggtctagag
701 tagtggaatt cgattgttct gggcaggcac actgtggggt gcagtattgg
751 gatgaacgtc atgtcattgc tgttccaagt cccatccaag gtcttactac
801 ttctctttgg aagtgactct atctttggaa tcctggatga ccctccaacc
851 tccaccagtg cgccctcatc tgtgactctg tagtagaccg aagtgtcgcc
901 tggaacctca gtctctaaca cgcagcggat cttgatctct ccatccccca
951 tttgaaggta attccgtatt tcttcgctag ttgggaaata actagagtca
1001 agcctcgccc agaattcctg ccatatgcct cttgtcgctc cgaggaatga
1051 ccagggcgag agcattacct cctccatagt caacctcctc atttcctttg
1101 cagtttttgc aggtcgagca gcccagtcgt agtggatata gttggcgatg
1151 ttgaccagga gtttggtgaa ggttttcctt tcagttcttg agaacacaat
1201 ttcctttatt agcggcccgt catgagtgta ccaacccctc acatcatcgt
1251 gccggaagtg tatcctctca attccagtgt attctctcca agagacaccc
1301 cctcctgagg tgaccaaccg gctttcttcc actgctgcct ctatgatcat
1351 ttgggtgccg aagtaatcat gagacttcga acaggggagg cccaagaggg
1401 attttatcac tttcactggg tagttttctt tggtttcttg aagcacctcc
1451 aacagcccct ggggcccttt cctcaagtgc agcagatggt cccttctttt
1501 ttctggtttt accttcaaca cctctctcat gatgagcgaa catgcctctc
1551 gcaagtcatt tgtgtctcct ggtgtgtcat agactctccc cggaaggtgg
1601 tgtaccatcc agttattccc ataataagag atagaatgct gtgccaagtt
1651 gtcatgaagg gtcacagcca cagggagcat gcgcatcttg ggatccaggg
1701 agttgaggag cactctggcc tgatctacaa ttgacatgcc aagcaccatc
1751 ttgtgcccaa ttttctccat tatcttttcc acatatattt tgacctctgg
1801 ttggttcagg ttgaacccag gctgaattat ttctaccact gctttctgtc
1851 gatactcctt ggggacgtcc accagaactt tccttgtagc cactacttgt
1901 ctttctttgg gcactatccc ataccttatg atggctcggt cccaactgtg
1951 actaagataa tctcttacta ggtcaaagga attctcatag agtaccttta
2001 tgacctgctt agtttcttca ttgggctcaa tttccttgtc aagccaaagg
2051 ttgagtgcct tcctggtgca tcttttccac cctggccttc tgcagtcctc
2101 ttcctcagca aagttagcag ctctctcctc tggtgtaaaa tggtgcaaat
2151 acttttcttt ggctaatata gggtattttt gtcccattaa caattgagtg
2201 gtcgcaattg ggtctgggtc tttcacaact cgggcatact tggtgaggac
2251 ccttttgttg cacacagggt tggacctcag gagtccgaaa acctggtctg
2301 ccagggggtc cagagctact gactttatct tcctcacgac acttagcagc
2351 cgggtcttcc ttgcctgcaa tgattccggg gtcgctgcca ttttttagat
2401 aaaaagagat ttgtgattgc t