Sequence of DPV Jatropha leaf curl virus

Jatropha leaf curl virus isolate Lucknow pre-coat protein gene, complete cds; and coat protein gene, partial cds.

ACC No: GQ499338

Dated: 2009-09-29 | Length: 532 | CRC: -1066425819

                
ID   GQ499338; SV 1; linear; genomic DNA; STD; VRL; 532 BP.
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AC   GQ499338;
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DT   29-SEP-2009 (Rel. 102, Created)
DT   29-SEP-2009 (Rel. 102, Last updated, Version 1)
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DE   Jatropha leaf curl virus isolate Lucknow pre-coat protein gene, complete
DE   cds; and coat protein gene, partial cds.
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KW   .
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OS   Jatropha leaf curl virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC   unclassified Begomovirus.
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RN   [1]
RP   1-532
RA   Raj S.K., Snehi S.K.;
RT   "Molecular characterization of a begomovirus causing mosaic disease in
RT   Jatropha podagrica in India";
RL   Unpublished.
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RN   [2]
RP   1-532
RA   Raj S.K., Snehi S.K.;
RT   ;
RL   Submitted (19-AUG-2009) to the EMBL/GenBank/DDBJ databases.
RL   Plant Molecular Virology Lab, National Botanical Research Institute,
RL   Lucknow, U.P. 226001, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .532
FT                   /organism="Jatropha leaf curl virus"
FT                   /host="Jatropha podagrica"
FT                   /isolate="Lucknow"
FT                   /mol_type="genomic DNA"
FT                   /country="India:Lucknow (U.P.)"
FT                   /collected_by="S. K. Snehi"
FT                   /collection_date="01-Jul-2009"
FT                   /identified_by="S. K. Raj"
FT                   /clone="SKS-5"
FT                   /db_xref="taxon:543876"
FT   CDS             143. .496
FT                   /codon_start=1
FT                   /product="pre-coat protein"
FT                   /note="AV2"
FT                   /protein_id="ACV92687.1"
FT                   /translation="MWDPLTNEFPETLHGFRCMLAVKYIQALLSSYAPDTVGYEYLRDL
FT                   ISVLRCRDYAKASVRYGRIVAAKNNTPETELRESLPSHCQCRHCPRHGIQKEGVDVATS
FT                   EQKTVDIQEKESS"
FT   CDS             303. .>532
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="AV1"
FT                   /protein_id="ACV92688.1"
FT                   /translation="MPKRLFDMVGSSPLRITRRKLNFGSPSRLIASAVTAPDMGYKRRA
FT                   WTWRPANRKPSIYRRRRAPDVPRGCEGPCKV"
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SQ   Sequence 532 BP; 153 A; 138 C; 136 G; 105 T; 0 other;

gq499338 Length: 532  29-SEP-2009  Type: N  Check: 552  ..

       1  accggatggc cgcgattttt tttaacgtgg accccacaac tgacaaacag
      51  acaaagaaaa gaaaagggaa cccagcacaa agagaaaaaa attaaagtcc
     101  cgcgcgctat aaaacttgct ggcgaaggag tagagccgca acatgtggga
     151  tccattaacc aacgagtttc ccgaaaccct gcacgggttt cgctgtatgc
     201  ttgcagtcaa atatatacaa gctctactct cttcgtacgc tcctgatacg
     251  gtcggatacg agtaccttcg tgatctgatc agcgtactac gctgccgcga
     301  ctatgccaaa gcgtctgttc gatatggtcg gatcgtcgcc gctaagaata
     351  acacgccgga aactgaactt cgggagtccc tcccgtctca ttgccagtgc
     401  cgtcactgcc ccagacatgg gatacaaaag gagggcgtgg acgtggcgac
     451  cagcgaacag aaaaccgtcg atatacagga gaaggagagc tcctgatgtg
     501  ccgcgtggat gtgaaggacc ttgcaaagtc ca