Sequence of DPV Potato virus Y

Potato virus Y isolate CC24_5 coat protein gene, partial cds.

ACC No: GQ853667

Dated: 2009-11-25 | Length: 807 | CRC: 869965629

                
ID   GQ853667; SV 1; linear; genomic RNA; STD; VRL; 807 BP.
XX
AC   GQ853667;
XX
DT   24-NOV-2009 (Rel. 102, Created)
DT   25-NOV-2009 (Rel. 102, Last updated, Version 2)
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DE   Potato virus Y isolate CC24_5 coat protein gene, partial cds.
XX
KW   .
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OS   Potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-807
RX   PUBMED; 19862472.
RA   Visser J.C., Bellstedt D.U.;
RT   "An assessment of molecular variability and recombination patterns in South
RT   African isolates of Potato virus Y";
RL   Arch. Virol. 154(12):1891-1900(2009).
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RN   [2]
RP   1-807
RA   Visser J.C., Bellstedt D.U.;
RT   ;
RL   Submitted (28-AUG-2009) to the EMBL/GenBank/DDBJ databases.
RL   Biochemistry, Stellenbosch University, Lab 165, Department of Biochemistry,
RL   JC Smuts Building, Van der Bijl Street, Stellenbosch, Western Cape 7600,
RL   South Africa
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FH   Key             Location/Qualifiers
FH
FT   source          1. .807
FT                   /organism="Potato virus Y"
FT                   /host="Solanum tuberosum"
FT                   /strain="N-Wi"
FT                   /isolate="CC24_5"
FT                   /mol_type="genomic RNA"
FT                   /country="South Africa"
FT                   /db_xref="taxon:12216"
FT   CDS             <1. .807
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /protein_id="ACZ26428.1"
FT                   /translation="MGNDTIDAGGSTKKDAKQEQGSIQPNLNKEKEKDVNVGTSGTHTV
FT                   PRIKAITSKMRMPRSKGATVLNLEHLLEYAPQQIDISNTRATQSQFDTWYEAVQLAYDI
FT                   GETEMPTVMNGLMVWCIENGTSPNINGVWVMMDGDEQVEYPLKPIVENAKPTLRQIMAH
FT                   FSDVAEAYIEMRNKKEPYMPRYGLVRNLRDGSLARYAFDFYEVTSRTPVRAREAHIQMK
FT                   AAALKSAQSRLFGLDGGISTQEENTERHTTEDVSPSMHTLLGVKNM"
XX
SQ   Sequence 807 BP; 283 A; 156 C; 186 G; 182 T; 0 other;

gq853667 Length: 807  25-NOV-2009  Type: N  Check: 1798  ..

       1  atgggaaatg acacaattga tgcaggagga agcactaaga aggatgcaaa
      51  acaagagcaa ggtagcattc aaccaaatct caacaaggaa aaggaaaagg
     101  acgtgaatgt tggaacatct ggaactcata ctgtgccacg aattaaagct
     151  atcacgtcca aaatgagaat gcccaggagt aaaggtgcaa ctgtactaaa
     201  tttggaacac ttactcgagt atgctccaca gcaaattgac atctcaaata
     251  ctcgagcaac tcaatcacag tttgatacgt ggtatgaagc agtacaactt
     301  gcatacgaca taggagaaac tgaaatgcca actgtgatga atgggcttat
     351  ggtttggtgc attgaaaatg gaacctcgcc aaacatcaac ggagtttggg
     401  ttatgatgga tggagatgaa caagtcgaat acccactgaa accaatcgtt
     451  gagaatgcaa aaccaacact taggcaaatc atggcacatt tctcagatgt
     501  tgcagaagcg tatatagaaa tgcgcaacaa aaaggaacca tatatgccac
     551  gatatggttt agttcgtaat ctgcgcgatg gaagtttggc tcgctatgct
     601  tttgactttt atgaagttac atcacggaca ccagtgaggg ctagagaggc
     651  acacattcaa atgaaggccg cagctttaaa atcagctcaa tctcgacttt
     701  tcggattgga tggtggcatt agtacacaag aggaaaacac agagaggcac
     751  accaccgagg atgtttctcc aagtatgcat actctacttg gagtcaaaaa
     801  catgtga