Sequence of DPV Hop stunt viroid

Hop stunt viroid clone HSVd.PN.11, complete genome.

ACC No: GQ995465

Dated: 2009-11-23 | Length: 298 | CRC: 549256359

                
ID   GQ995465; SV 1; circular; genomic RNA; STD; VRL; 298 BP.
XX
AC   GQ995465;
XX
DT   19-OCT-2009 (Rel. 102, Created)
DT   23-NOV-2009 (Rel. 102, Last updated, Version 2)
XX
DE   Hop stunt viroid clone HSVd.PN.11, complete genome.
XX
KW   .
XX
OS   Hop stunt viroid
OC   Viroids; Pospiviroidae; Hostuviroid.
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-298
RX   PUBMED; 19890399.
RA   Navarro B., Pantaleo V., Gisel A., Moxon S., Dalmay T., Bisztray G.,
RA   Di Serio F., Burgyan J.;
RT   "Deep sequencing of viroid-derived small RNAs from grapevine provides new
RT   insights on the role of RNA silencing in plant-viroid interaction";
RL   PLoS One 4(11):E7686-E7686(2009).
XX
RN   [2]
RP   1-298
RA   Navarro B., Di Serio F.;
RT   ;
RL   Submitted (23-SEP-2009) to the EMBL/GenBank/DDBJ databases.
RL   Istituto di Virologia Vegetale, Consiglio Nazionale delle Ricerche, Via
RL   Amendola 165/A, Bari 70126, Italy
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .298
FT                   /organism="Hop stunt viroid"
FT                   /host="Vitis vinifera cultivar Pinot noir, clone ENTAV115"
FT                   /mol_type="genomic RNA"
FT                   /country="Hungary"
FT                   /collection_date="May-2008"
FT                   /clone="HSVd.PN.11"
FT                   /db_xref="taxon:12893"
XX
SQ   Sequence 298 BP; 59 A; 88 C; 80 G; 71 T; 0 other;

gq995465 Length: 298  23-NOV-2009  Type: N  Check: 5229  ..

       1  ctggggaatt ctcgagttgc cgcataaggc atgcaaagaa aaaaacttgg
      51  cagggaggta cttacctgag aaaggagccc cggggcaact cttctcagaa
     101  tccagcgaga ggcgtggaga gagggccgcg gtgctctgga gtagaggctc
     151  tgccttcgaa acaccatcga tcgtcccttc ttctttacct ccttctggct
     201  cttccgatga gacgcgaccg gtggcatcac ctctcggttc gtcccaacct
     251  gcttttgttc tatctgagcc tctgccgcgg atcctctctt gagcccct